Literature DB >> 23852580

Small angle neutron scattering for the study of solubilised membrane proteins.

Cécile Breyton1, Frank Gabel, Mathilde Lethier, Ali Flayhan, Grégory Durand, Jean-Michel Jault, Céline Juillan-Binard, Lionel Imbert, Martine Moulin, Stéphanie Ravaud, Michael Härtlein, Christine Ebel.   

Abstract

Small angle neutron scattering (SANS) is a powerful technique for investigating association states and conformational changes of biological macromolecules in solution. SANS is of particular interest for the study of the multi-component systems, as membrane protein complexes, for which in vitro characterisation and structure determination are often difficult. This article details the important physical properties of surfactants in view of small angle neutron scattering studies and the interest to deuterate membrane proteins for contrast variation studies. We present strategies for the production of deuterated membrane proteins and methods for quality control. We then review some studies on membrane proteins, and focus on the strategies to overcome the intrinsic difficulty to eliminate homogeneously the detergent or surfactant signal for solubilised membrane proteins, or that of lipids for membrane proteins inserted in liposomes.

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Year:  2013        PMID: 23852580     DOI: 10.1140/epje/i2013-13071-6

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  51 in total

Review 1.  Crowding in extremophiles: linkage between solvation and weak protein-protein interactions, stability and dynamics, provides insight into molecular adaptation.

Authors:  Christine Ebel; Giuseppe Zaccai
Journal:  J Mol Recognit       Date:  2004 Sep-Oct       Impact factor: 2.137

2.  The crystal structure of filamentous hemagglutinin secretion domain and its implications for the two-partner secretion pathway.

Authors:  Bernard Clantin; Hélène Hodak; Eve Willery; Camille Locht; Françoise Jacob-Dubuisson; Vincent Villeret
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-12       Impact factor: 11.205

Review 3.  Sedimentation velocity to characterize surfactants and solubilized membrane proteins.

Authors:  Christine Ebel
Journal:  Methods       Date:  2010-11-26       Impact factor: 3.608

4.  Solvent interactions of halophilic malate dehydrogenase.

Authors:  Christine Ebel; Lionel Costenaro; Mihaela Pascu; Pierre Faou; Blandine Kernel; Flavien Proust-De Martin; Giuseppe Zaccai
Journal:  Biochemistry       Date:  2002-11-05       Impact factor: 3.162

Review 5.  Small angle neutron scattering.

Authors:  G Zaccaï; B Jacrot
Journal:  Annu Rev Biophys Bioeng       Date:  1983

6.  Modular structure of solubilized human apolipoprotein B-100. Low resolution model revealed by small angle neutron scattering.

Authors:  Alexander Johs; Michal Hammel; Ines Waldner; Roland P May; Peter Laggner; Ruth Prassl
Journal:  J Biol Chem       Date:  2006-05-16       Impact factor: 5.157

7.  New insights into pb5, the receptor binding protein of bacteriophage T5, and its interaction with its Escherichia coli receptor FhuA.

Authors:  Ali Flayhan; Frank Wien; Maïté Paternostre; Pascale Boulanger; Cécile Breyton
Journal:  Biochimie       Date:  2012-05-29       Impact factor: 4.079

8.  Ezrin induces long-range interdomain allostery in the scaffolding protein NHERF1.

Authors:  Jianquan Li; David J E Callaway; Zimei Bu
Journal:  J Mol Biol       Date:  2009-07-08       Impact factor: 5.469

9.  Three-dimensional cryoEM reconstruction of native LDL particles to 16Å resolution at physiological body temperature.

Authors:  Vibhor Kumar; Sarah J Butcher; Katariina Öörni; Peter Engelhardt; Jukka Heikkonen; Kimmo Kaski; Mika Ala-Korpela; Petri T Kovanen
Journal:  PLoS One       Date:  2011-05-09       Impact factor: 3.240

10.  Low resolution structure and dynamics of a colicin-receptor complex determined by neutron scattering.

Authors:  Luke A Clifton; Christopher L Johnson; Alexandra S Solovyova; Phil Callow; Kevin L Weiss; Helen Ridley; Anton P Le Brun; Christian J Kinane; John R P Webster; Stephen A Holt; Jeremy H Lakey
Journal:  J Biol Chem       Date:  2011-11-10       Impact factor: 5.157

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  19 in total

1.  Editorial on the topical issue "neutron biological physics".

Authors:  Giovanna Fragneto; Frank Gabel
Journal:  Eur Phys J E Soft Matter       Date:  2013-07-30       Impact factor: 1.890

2.  Assessing the conformational changes of pb5, the receptor-binding protein of phage T5, upon binding to its Escherichia coli receptor FhuA.

Authors:  Cécile Breyton; Ali Flayhan; Frank Gabel; Mathilde Lethier; Grégory Durand; Pascale Boulanger; Mohamed Chami; Christine Ebel
Journal:  J Biol Chem       Date:  2013-09-06       Impact factor: 5.157

3.  Preparation of a Deuterated Membrane Protein for Small-Angle Neutron Scattering.

Authors:  Yuqi Wu; Kevin L Weiss; Raquel L Lieberman
Journal:  Methods Mol Biol       Date:  2021

4.  Human Dystrophin Structural Changes upon Binding to Anionic Membrane Lipids.

Authors:  Raphael Dos Santos Morais; Olivier Delalande; Javier Pérez; Dominique Mias-Lucquin; Mélanie Lagarrigue; Anne Martel; Anne-Elisabeth Molza; Angélique Chéron; Céline Raguénès-Nicol; Thomas Chenuel; Arnaud Bondon; Marie-Sousai Appavou; Elisabeth Le Rumeur; Sophie Combet; Jean-François Hubert
Journal:  Biophys J       Date:  2018-08-17       Impact factor: 4.033

5.  Interdomain Flexibility within NADPH Oxidase Suggested by SANS Using LMNG Stealth Carrier.

Authors:  Annelise Vermot; Isabelle Petit-Härtlein; Cécile Breyton; Aline Le Roy; Michel Thépaut; Corinne Vivès; Martine Moulin; Michael Härtlein; Sergei Grudinin; Susan M E Smith; Christine Ebel; Anne Martel; Franck Fieschi
Journal:  Biophys J       Date:  2020-07-03       Impact factor: 4.033

6.  Probing the conformation of FhaC with small-angle neutron scattering and molecular modeling.

Authors:  Frank Gabel; Marc F Lensink; Bernard Clantin; Françoise Jacob-Dubuisson; Vincent Villeret; Christine Ebel
Journal:  Biophys J       Date:  2014-07-01       Impact factor: 4.033

7.  Low-Resolution Structure of Detergent-Solubilized Membrane Proteins from Small-Angle Scattering Data.

Authors:  Alexandros Koutsioubas
Journal:  Biophys J       Date:  2017-12-05       Impact factor: 4.033

8.  Solution Structure of an Intramembrane Aspartyl Protease via Small Angle Neutron Scattering.

Authors:  Swe-Htet Naing; Ryan C Oliver; Kevin L Weiss; Volker S Urban; Raquel L Lieberman
Journal:  Biophys J       Date:  2018-02-06       Impact factor: 4.033

Review 9.  Using X-ray Footprinting and Mass Spectrometry to Study the Structure and Function of Membrane Proteins.

Authors:  Sayan Gupta
Journal:  Protein Pept Lett       Date:  2019       Impact factor: 1.890

Review 10.  Hybrid Approaches to Structural Characterization of Conformational Ensembles of Complex Macromolecular Systems Combining NMR Residual Dipolar Couplings and Solution X-ray Scattering.

Authors:  Vincenzo Venditti; Timothy K Egner; G Marius Clore
Journal:  Chem Rev       Date:  2016-01-07       Impact factor: 60.622

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