Literature DB >> 24014030

Assessing the conformational changes of pb5, the receptor-binding protein of phage T5, upon binding to its Escherichia coli receptor FhuA.

Cécile Breyton1, Ali Flayhan, Frank Gabel, Mathilde Lethier, Grégory Durand, Pascale Boulanger, Mohamed Chami, Christine Ebel.   

Abstract

Within tailed bacteriophages, interaction of the receptor-binding protein (RBP) with the target cell triggers viral DNA ejection into the host cytoplasm. In the case of phage T5, the RBP pb5 and the receptor FhuA, an outer membrane protein of Escherichia coli, have been identified. Here, we use small angle neutron scattering and electron microscopy to investigate the FhuA-pb5 complex. Specific deuteration of one of the partners allows the complete masking in small angle neutron scattering of the surfactant and unlabeled proteins when the complex is solubilized in the fluorinated surfactant F6-DigluM. Thus, individual structures within a membrane protein complex can be described. The solution structure of FhuA agrees with its crystal structure; that of pb5 shows an elongated shape. Neither displays significant conformational changes upon interaction. The mechanism of signal transduction within phage T5 thus appears different from that of phages binding cell wall saccharides, for which structural information is available.

Entities:  

Keywords:  Bacteriophage; Biophysics; Electron Microscopy (EM); Fluorinated Surfactant; Membrane Proteins; Small Angle Neutron Scattering; Viral Protein

Mesh:

Substances:

Year:  2013        PMID: 24014030      PMCID: PMC3798546          DOI: 10.1074/jbc.M113.501536

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  47 in total

1.  EMAN: semiautomated software for high-resolution single-particle reconstructions.

Authors:  S J Ludtke; P R Baldwin; W Chiu
Journal:  J Struct Biol       Date:  1999-12-01       Impact factor: 2.867

2.  FhuA-mediated phage genome transfer into liposomes: a cryo-electron tomography study.

Authors:  J Böhm; O Lambert; A S Frangakis; L Letellier; W Baumeister; J L Rigaud
Journal:  Curr Biol       Date:  2001-08-07       Impact factor: 10.834

3.  Bacteriophage therapy. Food and agriculture: testing grounds for phage therapy.

Authors:  Richard Stone
Journal:  Science       Date:  2002-10-25       Impact factor: 47.728

Review 4.  FhuA (TonA), the career of a protein.

Authors:  Volkmar Braun
Journal:  J Bacteriol       Date:  2009-03-27       Impact factor: 3.490

5.  Analytical ultracentrifugation sedimentation velocity for the characterization of detergent-solubilized membrane proteins Ca++-ATPase and ExbB.

Authors:  Andrés G Salvay; Monica Santamaria; Marc le Maire; Christine Ebel
Journal:  J Biol Phys       Date:  2008-04-25       Impact factor: 1.365

6.  The C-terminal portion of the tail fiber protein of bacteriophage lambda is responsible for binding to LamB, its receptor at the surface of Escherichia coli K-12.

Authors:  J Wang; M Hofnung; A Charbit
Journal:  J Bacteriol       Date:  2000-01       Impact factor: 3.490

7.  Glucose-based surfactants with hydrogenated, fluorinated, or hemifluorinated tails: synthesis and comparative physical-chemical characterization.

Authors:  Maher Abla; Grégory Durand; Bernard Pucci
Journal:  J Org Chem       Date:  2008-09-30       Impact factor: 4.354

8.  The ectodomain of the viral receptor YueB forms a fiber that triggers ejection of bacteriophage SPP1 DNA.

Authors:  Carlos São-José; Sophie Lhuillier; Rudi Lurz; Ronald Melki; Jean Lepault; Mário Almeida Santos; Paulo Tavares
Journal:  J Biol Chem       Date:  2006-02-14       Impact factor: 5.157

9.  Characterization of a high-affinity complex between the bacterial outer membrane protein FhuA and the phage T5 protein pb5.

Authors:  L Plançon; C Janmot; M le Maire; M Desmadril; M Bonhivers; L Letellier; P Boulanger
Journal:  J Mol Biol       Date:  2002-04-26       Impact factor: 5.469

10.  Structure of bacteriophage SPP1 tail reveals trigger for DNA ejection.

Authors:  Celia Plisson; Helen E White; Isabelle Auzat; Amineh Zafarani; Carlos São-José; Sophie Lhuillier; Paulo Tavares; Elena V Orlova
Journal:  EMBO J       Date:  2007-07-05       Impact factor: 11.598

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  17 in total

1.  Revisiting the host adhesion determinants of Streptococcus thermophilus siphophages.

Authors:  Katherine Lavelle; Adeline Goulet; Brian McDonnell; Silvia Spinelli; Douwe van Sinderen; Jennifer Mahony; Christian Cambillau
Journal:  Microb Biotechnol       Date:  2020-06-11       Impact factor: 5.813

2.  Crystallization of the C-terminal domain of the bacteriophage T5 L-shaped fibre.

Authors:  Carmela Garcia-Doval; Daniel Luque; José R Castón; Pascale Boulanger; Mark J van Raaij
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-11-28

3.  Crystal structure of pb9, the distal tail protein of bacteriophage T5: a conserved structural motif among all siphophages.

Authors:  Ali Flayhan; Frédéric M D Vellieux; Rudi Lurz; Olivier Maury; Carlos Contreras-Martel; Eric Girard; Pascale Boulanger; Cécile Breyton
Journal:  J Virol       Date:  2013-10-23       Impact factor: 5.103

4.  Examining Membrane Proteins by Neutron Scattering.

Authors:  Christine Ebel; Cécile Breyton; Anne Martel
Journal:  Methods Mol Biol       Date:  2020

5.  Interdomain Flexibility within NADPH Oxidase Suggested by SANS Using LMNG Stealth Carrier.

Authors:  Annelise Vermot; Isabelle Petit-Härtlein; Cécile Breyton; Aline Le Roy; Michel Thépaut; Corinne Vivès; Martine Moulin; Michael Härtlein; Sergei Grudinin; Susan M E Smith; Christine Ebel; Anne Martel; Franck Fieschi
Journal:  Biophys J       Date:  2020-07-03       Impact factor: 4.033

6.  Probing the conformation of FhaC with small-angle neutron scattering and molecular modeling.

Authors:  Frank Gabel; Marc F Lensink; Bernard Clantin; Françoise Jacob-Dubuisson; Vincent Villeret; Christine Ebel
Journal:  Biophys J       Date:  2014-07-01       Impact factor: 4.033

Review 7.  Structures and host-adhesion mechanisms of lactococcal siphophages.

Authors:  Silvia Spinelli; David Veesler; Cecilia Bebeacua; Christian Cambillau
Journal:  Front Microbiol       Date:  2014-01-16       Impact factor: 5.640

8.  Aberrantly Large Single-Channel Conductance of Polyhistidine Arm-Containing Protein Nanopores.

Authors:  Avinash Kumar Thakur; Motahareh Ghahari Larimi; Kristin Gooden; Liviu Movileanu
Journal:  Biochemistry       Date:  2017-08-28       Impact factor: 3.162

9.  Structural basis for host recognition and superinfection exclusion by bacteriophage T5.

Authors:  Bert van den Berg; Augustinas Silale; Arnaud Baslé; Astrid F Brandner; Sophie L Mader; Syma Khalid
Journal:  Proc Natl Acad Sci U S A       Date:  2022-10-10       Impact factor: 12.779

10.  Insights into bacteriophage T5 structure from analysis of its morphogenesis genes and protein components.

Authors:  Yvan Zivanovic; Fabrice Confalonieri; Luc Ponchon; Rudi Lurz; Mohamed Chami; Ali Flayhan; Madalena Renouard; Alexis Huet; Paulette Decottignies; Alan R Davidson; Cécile Breyton; Pascale Boulanger
Journal:  J Virol       Date:  2013-11-06       Impact factor: 5.103

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