Literature DB >> 23839992

Chemoenzymatic site-specific reversible immobilization and labeling of proteins from crude cellular extract without prior purification using oxime and hydrazine ligation.

Mohammad M Mahmoodi1, Mohammad Rashidian, Jonathan K Dozier, Mark D Distefano.   

Abstract

In a facile and potentially general method for protein modification at the C-terminus, aldehyde-modified proteins, obtained from enzymatic protein prenylation, react rapidly with hydrazide and aminooxy surfaces and fluorophores at neutral pH and in micromolar concentration ranges of reagents. This strategy was used for fluorescent labeling of eGFP-CVIA, as a model protein, with aminooxy and hydrazide fluorophores or PEGs, and immobilization onto and subsequent release of the protein from hydrazide-functionalized agarose beads using hydrazone-oxime exchange. This method is described in detail here and provides site-specifically PEGylated or fluorescently labeled proteins starting from crude cellular extract in three steps: prenylation, capture, and release.
© 2013 by John Wiley & Sons, Inc.

Entities:  

Keywords:  PFTase; farnesyl diphosphate; hydrazine ligation; oxime ligation; protein immobilization; site‐specific protein modification

Mesh:

Substances:

Year:  2013        PMID: 23839992      PMCID: PMC4037151          DOI: 10.1002/9780470559277.ch120247

Source DB:  PubMed          Journal:  Curr Protoc Chem Biol        ISSN: 2160-4762


  24 in total

1.  Labeling of fusion proteins with synthetic fluorophores in live cells.

Authors:  Antje Keppler; Horst Pick; Claudio Arrivoli; Horst Vogel; Kai Johnsson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-28       Impact factor: 11.205

2.  Selective labeling of proteins by using protein farnesyltransferase.

Authors:  Benjamin P Duckworth; Zhiyuan Zhang; Ayako Hosokawa; Mark D Distefano
Journal:  Chembiochem       Date:  2007-01-02       Impact factor: 3.164

3.  Hydrolytic stability of hydrazones and oximes.

Authors:  Jeet Kalia; Ronald T Raines
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

Review 4.  PEGylation of therapeutic proteins.

Authors:  Simona Jevsevar; Menci Kunstelj; Vladka Gaberc Porekar
Journal:  Biotechnol J       Date:  2010-01       Impact factor: 4.677

5.  Controlled and oriented immobilization of protein by site-specific incorporation of unnatural amino acid.

Authors:  Moon-Hyeong Seo; Jieun Han; Zongwen Jin; Dong-Won Lee; Hee-Sung Park; Hak-Sung Kim
Journal:  Anal Chem       Date:  2011-03-23       Impact factor: 6.986

6.  Chemoenzymatic reversible immobilization and labeling of proteins without prior purification.

Authors:  Mohammad Rashidian; James M Song; Rachel E Pricer; Mark D Distefano
Journal:  J Am Chem Soc       Date:  2012-05-08       Impact factor: 15.419

7.  An enzyme-coupled continuous fluorescence assay for farnesyl diphosphate synthases.

Authors:  Jonathan K Dozier; Mark D Distefano
Journal:  Anal Biochem       Date:  2011-10-28       Impact factor: 3.365

8.  Site-specific fluorescent labeling of nascent proteins on the translating ribosome.

Authors:  Ishu Saraogi; Dawei Zhang; Sandhya Chandrasekaran; Shu-ou Shan
Journal:  J Am Chem Soc       Date:  2011-09-02       Impact factor: 15.419

9.  Site-specific PEGylation of proteins containing unnatural amino acids.

Authors:  Alexander Deiters; T Ashton Cropp; Daniel Summerer; Mridul Mukherji; Peter G Schultz
Journal:  Bioorg Med Chem Lett       Date:  2004-12-06       Impact factor: 2.823

10.  C-terminal mini-PEGylation of glucose-dependent insulinotropic polypeptide exhibits metabolic stability and improved glucose homeostasis in dietary-induced diabetes.

Authors:  Victor A Gault; Barry D Kerr; Nigel Irwin; Peter R Flatt
Journal:  Biochem Pharmacol       Date:  2008-03-26       Impact factor: 5.858

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  4 in total

Review 1.  Enzymatic labeling of proteins: techniques and approaches.

Authors:  Mohammad Rashidian; Jonathan K Dozier; Mark D Distefano
Journal:  Bioconjug Chem       Date:  2013-08-21       Impact factor: 4.774

2.  Application of meta- and para-Phenylenediamine as Enhanced Oxime Ligation Catalysts for Protein Labeling, PEGylation, Immobilization, and Release.

Authors:  Mohammad M Mahmoodi; Mohammad Rashidian; Yi Zhang; Mark D Distefano
Journal:  Curr Protoc Protein Sci       Date:  2015-02-02

3.  Metabolic Labeling of Prenylated Proteins Using Alkyne-Modified Isoprenoid Analogues.

Authors:  Kiall F Suazo; Alexander K Hurben; Kevin Liu; Feng Xu; Pa Thao; Ch Sudheer; Ling Li; Mark D Distefano
Journal:  Curr Protoc Chem Biol       Date:  2018-07-30

Review 4.  Protein prenylation: enzymes, therapeutics, and biotechnology applications.

Authors:  Charuta C Palsuledesai; Mark D Distefano
Journal:  ACS Chem Biol       Date:  2014-12-08       Impact factor: 5.100

  4 in total

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