Literature DB >> 23834317

Selection and adaptation in the human genome.

Wenqing Fu1, Joshua M Akey.   

Abstract

An enduring goal of evolutionary biology is to understand how natural selection has shaped patterns of polymorphism and divergence within and between species and to map the genetic basis of adaptations. The rapid maturation of next-generation sequencing technology has generated a deluge of genomics data from nonhuman primates, extinct hominins, and diverse human populations. These emerging genome data sets have simultaneously broadened our understanding of human evolution and sharply defined existing gaps in knowledge about the mechanistic basis of evolutionary change. In this review, we summarize recent insights into how natural selection has influenced the human genome across different timescales. Although the path to a more comprehensive understanding of selection and adaptation in humans remains arduous, some general insights are beginning to emerge, such as the importance of adaptive regulatory evolution, the absence of pervasive classic selective sweeps, and the potential roles that selection from standing variation and polygenic adaptation have likely played in recent human evolutionary history.

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Year:  2013        PMID: 23834317     DOI: 10.1146/annurev-genom-091212-153509

Source DB:  PubMed          Journal:  Annu Rev Genomics Hum Genet        ISSN: 1527-8204            Impact factor:   8.929


  49 in total

1.  Selective Strolls: Fixation and Extinction in Diploids Are Slower for Weakly Selected Mutations Than for Neutral Ones.

Authors:  Fabrizio Mafessoni; Michael Lachmann
Journal:  Genetics       Date:  2015-10-23       Impact factor: 4.562

2.  Origin and differential selection of allelic variation at TAS2R16 associated with salicin bitter taste sensitivity in Africa.

Authors:  Michael C Campbell; Alessia Ranciaro; Daniel Zinshteyn; Renata Rawlings-Goss; Jibril Hirbo; Simon Thompson; Dawit Woldemeskel; Alain Froment; Joseph B Rucker; Sabah A Omar; Jean-Marie Bodo; Thomas Nyambo; Gurja Belay; Dennis Drayna; Paul A S Breslin; Sarah A Tishkoff
Journal:  Mol Biol Evol       Date:  2013-10-30       Impact factor: 16.240

3.  Evidence that the rate of strong selective sweeps increases with population size in the great apes.

Authors:  Kiwoong Nam; Kasper Munch; Thomas Mailund; Alexander Nater; Maja Patricia Greminger; Michael Krützen; Tomàs Marquès-Bonet; Mikkel Heide Schierup
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-30       Impact factor: 11.205

4.  No Evidence for Widespread Positive Selection Signatures in Common Risk Alleles Associated with Schizophrenia.

Authors:  Yao Yao; Jia Yang; Yimin Xie; Hai Liao; Baoying Yang; Qi Xu; Shuquan Rao
Journal:  Schizophr Bull       Date:  2020-04-10       Impact factor: 9.306

5.  Adaptive, convergent origins of the pygmy phenotype in African rainforest hunter-gatherers.

Authors:  George H Perry; Matthieu Foll; Jean-Christophe Grenier; Etienne Patin; Yohann Nédélec; Alain Pacis; Maxime Barakatt; Simon Gravel; Xiang Zhou; Sam L Nsobya; Laurent Excoffier; Lluis Quintana-Murci; Nathaniel J Dominy; Luis B Barreiro
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-18       Impact factor: 11.205

Review 6.  Genomic insights into ayurvedic and western approaches to personalized medicine.

Authors:  Bhavana Prasher; Greg Gibson; Mitali Mukerji
Journal:  J Genet       Date:  2016-03       Impact factor: 1.166

7.  Detecting Recent Positive Selection with a Single Locus Test Bipartitioning the Coalescent Tree.

Authors:  Zongfeng Yang; Junrui Li; Thomas Wiehe; Haipeng Li
Journal:  Genetics       Date:  2017-12-07       Impact factor: 4.562

8.  Enhancing the mathematical properties of new haplotype homozygosity statistics for the detection of selective sweeps.

Authors:  Nandita R Garud; Noah A Rosenberg
Journal:  Theor Popul Biol       Date:  2015-04-16       Impact factor: 1.570

9.  Gender Interacts with Opioid Receptor Polymorphism A118G and Serotonin Receptor Polymorphism -1438 A/G on Speed-Dating Success.

Authors:  Karen Wu; Chuansheng Chen; Robert K Moyzis; Ellen Greenberger; Zhaoxia Yu
Journal:  Hum Nat       Date:  2016-09

Review 10.  The evolution of the human genome.

Authors:  Corinne N Simonti; John A Capra
Journal:  Curr Opin Genet Dev       Date:  2015-09-09       Impact factor: 5.578

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