Literature DB >> 26338498

The evolution of the human genome.

Corinne N Simonti1, John A Capra2.   

Abstract

Human genomes hold a record of the evolutionary forces that have shaped our species. Advances in DNA sequencing, functional genomics, and population genetic modeling have deepened our understanding of human demographic history, natural selection, and many other long-studied topics. These advances have also revealed many previously underappreciated factors that influence the evolution of the human genome, including functional modifications to DNA and histones, conserved 3D topological chromatin domains, structural variation, and heterogeneous mutation patterns along the genome. Using evolutionary theory as a lens to study these phenomena will lead to significant breakthroughs in understanding what makes us human and why we get sick.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 26338498      PMCID: PMC4695266          DOI: 10.1016/j.gde.2015.08.005

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  98 in total

Review 1.  Epigenetics and the environment: emerging patterns and implications.

Authors:  Robert Feil; Mario F Fraga
Journal:  Nat Rev Genet       Date:  2012-01-04       Impact factor: 53.242

2.  Editorial overview: genetics of human evolution: the genetics of human origins.

Authors:  Aida M Andrés; Katja Nowick
Journal:  Curr Opin Genet Dev       Date:  2014-12       Impact factor: 5.578

Review 3.  Integrating genomics into evolutionary medicine.

Authors:  Juan Antonio Rodríguez; Urko M Marigorta; Arcadi Navarro
Journal:  Curr Opin Genet Dev       Date:  2014-09-16       Impact factor: 5.578

4.  The eMERGE Network: a consortium of biorepositories linked to electronic medical records data for conducting genomic studies.

Authors:  Catherine A McCarty; Rex L Chisholm; Christopher G Chute; Iftikhar J Kullo; Gail P Jarvik; Eric B Larson; Rongling Li; Daniel R Masys; Marylyn D Ritchie; Dan M Roden; Jeffery P Struewing; Wendy A Wolf
Journal:  BMC Med Genomics       Date:  2011-01-26       Impact factor: 3.063

5.  A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.

Authors:  Suhas S P Rao; Miriam H Huntley; Neva C Durand; Elena K Stamenova; Ivan D Bochkov; James T Robinson; Adrian L Sanborn; Ido Machol; Arina D Omer; Eric S Lander; Erez Lieberman Aiden
Journal:  Cell       Date:  2014-12-11       Impact factor: 41.582

Review 6.  New genes contribute to genetic and phenotypic novelties in human evolution.

Authors:  Yong E Zhang; Manyuan Long
Journal:  Curr Opin Genet Dev       Date:  2014-09-16       Impact factor: 5.578

Review 7.  Ancient humans and the origin of modern humans.

Authors:  Janet Kelso; Kay Prüfer
Journal:  Curr Opin Genet Dev       Date:  2014-10-03       Impact factor: 5.578

8.  Genomic variation. Impact of regulatory variation from RNA to protein.

Authors:  Alexis Battle; Zia Khan; Sidney H Wang; Amy Mitrano; Michael J Ford; Jonathan K Pritchard; Yoav Gilad
Journal:  Science       Date:  2014-12-18       Impact factor: 47.728

9.  Enhancer evolution across 20 mammalian species.

Authors:  Diego Villar; Camille Berthelot; Sarah Aldridge; Tim F Rayner; Margus Lukk; Miguel Pignatelli; Thomas J Park; Robert Deaville; Jonathan T Erichsen; Anna J Jasinska; James M A Turner; Mads F Bertelsen; Elizabeth P Murchison; Paul Flicek; Duncan T Odom
Journal:  Cell       Date:  2015-01-29       Impact factor: 41.582

10.  Epigenetic modifications are associated with inter-species gene expression variation in primates.

Authors:  Xiang Zhou; Carolyn E Cain; Marsha Myrthil; Noah Lewellen; Katelyn Michelini; Emily R Davenport; Matthew Stephens; Jonathan K Pritchard; Yoav Gilad
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

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  3 in total

Review 1.  Metabolomics Analysis of Mesenchymal Stem Cells.

Authors:  Parisa Goodarzi; Sepideh Alavi-Moghadam; Moloud Payab; Bagher Larijani; Fakher Rahim; Kambiz Gilany; Nikoo Bana; Akram Tayanloo-Beik; Najmeh Foroughi Heravani; Mahdieh Hadavandkhani; Babak Arjmand
Journal:  Int J Mol Cell Med       Date:  2019-06-20

2.  Gene Size Matters: An Analysis of Gene Length in the Human Genome.

Authors:  Inês Lopes; Gulam Altab; Priyanka Raina; João Pedro de Magalhães
Journal:  Front Genet       Date:  2021-02-11       Impact factor: 4.599

3.  Alu SINE analyses of 3,000-year-old human skeletal remains: a pilot study.

Authors:  Maximilian Kothe; Verena Seidenberg; Susanne Hummel; Oliver Piskurek
Journal:  Mob DNA       Date:  2016-04-18
  3 in total

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