Literature DB >> 23832016

Automating ultrasonic vocalization analyses: the WAAVES program.

James M Reno1, Bryan Marker, Lawrence K Cormack, Timothy Schallert, Christine L Duvauchelle.   

Abstract

BACKGROUND: Human emotion is a crucial component of drug abuse and addiction. Ultrasonic vocalizations (USVs) elicited by rodents are a highly translational animal model of emotion in drug abuse studies. A major roadblock to comprehensive use of USV data is the overwhelming burden to attain accurate USV assessment in a timely manner. One of the most accurate methods of analyzing USVs, human auditory detection with simultaneous spectrogram inspection, requires USV sound files to be played back 4% normal speed. NEW
METHOD: WAAVES (WAV-file Automated Analysis of Vocalizations Environment Specific) is an automated USV assessment program utilizing MATLAB's Signal and Image Processing Toolboxes in conjunction with a series of customized filters to separate USV calls from background noise, and accurately tabulate and categorize USVs as flat or frequency-modulated (FM) calls. In the current report, WAAVES functionality is demonstrated by USV analyses of cocaine self-administration data collected over 10 daily sessions.
RESULTS: WAAVES counts are significantly correlated with human auditory counts (r(48)=0.9925; p<0.001). Statistical analyses used WAAVES output to examine individual differences in USV responses to cocaine, cocaine-associated cues and relationships between USVs, cocaine intake and locomotor activity. COMPARISON WITH EXISTING
METHOD: WAAVES output is highly accurate and provides tabulated data in approximately 0.3% of the time required when using human auditory detection methods.
CONCLUSIONS: The development of a customized USV analysis program, such as WAAVES streamlines USV assessment and enhances the ability to utilize USVs as a tool to advance drug abuse research and ultimately develop effective treatments. Published by Elsevier B.V.

Entities:  

Keywords:  Addiction; Cocaine; Craving; Rat; Self-administration; USV

Mesh:

Substances:

Year:  2013        PMID: 23832016      PMCID: PMC3931607          DOI: 10.1016/j.jneumeth.2013.06.006

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  25 in total

1.  Cocaine deprivation effect: cue abstinence over weekends boosts anticipatory 50-kHz ultrasonic vocalizations in rats.

Authors:  Esther Y Maier; Allison M Ahrens; Sean T Ma; Timothy Schallert; Christine L Duvauchelle
Journal:  Behav Brain Res       Date:  2010-05-12       Impact factor: 3.332

2.  Repeated intravenous amphetamine exposure: rapid and persistent sensitization of 50-kHz ultrasonic trill calls in rats.

Authors:  Allison M Ahrens; Sean T Ma; Esther Y Maier; Christine L Duvauchelle; Timothy Schallert
Journal:  Behav Brain Res       Date:  2008-09-03       Impact factor: 3.332

3.  Limbic activation during cue-induced cocaine craving.

Authors:  A R Childress; P D Mozley; W McElgin; J Fitzgerald; M Reivich; C P O'Brien
Journal:  Am J Psychiatry       Date:  1999-01       Impact factor: 18.112

4.  Identification of multiple call categories within the rich repertoire of adult rat 50-kHz ultrasonic vocalizations: effects of amphetamine and social context.

Authors:  Jennifer M Wright; Jim C Gourdon; Paul B S Clarke
Journal:  Psychopharmacology (Berl)       Date:  2010-05-06       Impact factor: 4.530

5.  Repeated intravenous cocaine experience: development and escalation of pre-drug anticipatory 50-kHz ultrasonic vocalizations in rats.

Authors:  Sean T Ma; Esther Y Maier; Allison M Ahrens; Timothy Schallert; Christine L Duvauchelle
Journal:  Behav Brain Res       Date:  2010-04-09       Impact factor: 3.332

6.  Dose-dependent differences in short ultrasonic vocalizations emitted by rats during cocaine self-administration.

Authors:  David J Barker; David H Root; Sisi Ma; Shaili Jha; Laura Megehee; Anthony P Pawlak; Mark O West
Journal:  Psychopharmacology (Berl)       Date:  2010-06-23       Impact factor: 4.530

7.  High-frequency ultrasonic vocalizations index conditioned pharmacological reward in rats.

Authors:  B Knutson; J Burgdorf; J Panksepp
Journal:  Physiol Behav       Date:  1999-06

8.  Heat increases MDMA-enhanced NAcc 5-HT and body temperature, but not MDMA self-administration.

Authors:  Allison A Feduccia; Nundhun Kongovi; Christine L Duvauchelle
Journal:  Eur Neuropsychopharmacol       Date:  2010-12       Impact factor: 4.600

9.  Communication of adult rats by ultrasonic vocalization: biological, sociobiological, and neuroscience approaches.

Authors:  Stefan M Brudzynski
Journal:  ILAR J       Date:  2009

10.  Ultrasonic vocalizations of rats (Rattus norvegicus) during mating, play, and aggression: Behavioral concomitants, relationship to reward, and self-administration of playback.

Authors:  Jeffrey Burgdorf; Roger A Kroes; Joseph R Moskal; James G Pfaus; Stefan M Brudzynski; Jaak Panksepp
Journal:  J Comp Psychol       Date:  2008-11       Impact factor: 2.231

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  19 in total

1.  DeepSqueak: a deep learning-based system for detection and analysis of ultrasonic vocalizations.

Authors:  Kevin R Coffey; Russell G Marx; John F Neumaier
Journal:  Neuropsychopharmacology       Date:  2019-01-04       Impact factor: 7.853

2.  Automated detection of 50-kHz ultrasonic vocalizations using template matching in XBAT.

Authors:  David J Barker; Christopher Herrera; Mark O West
Journal:  J Neurosci Methods       Date:  2014-08-13       Impact factor: 2.390

3.  Alcohol-preferring P rats emit spontaneous 22-28 kHz ultrasonic vocalizations that are altered by acute and chronic alcohol experience.

Authors:  James M Reno; Neha Thakore; Rueben Gonzales; Timothy Schallert; Richard L Bell; W Todd Maddox; Christine L Duvauchelle
Journal:  Alcohol Clin Exp Res       Date:  2015-04-01       Impact factor: 3.455

4.  Alcohol-naïve USVs distinguish male HAD-1 from LAD-1 rat strains.

Authors:  Nitish Mittal; Neha Thakore; James M Reno; Richard L Bell; W Todd Maddox; Timothy Schallert; Christine L Duvauchelle
Journal:  Alcohol       Date:  2017-09-14       Impact factor: 2.405

5.  Sex-specific ultrasonic vocalization patterns and alcohol consumption in high alcohol-drinking (HAD-1) rats.

Authors:  N Mittal; N Thakore; R L Bell; W T Maddox; T Schallert; C L Duvauchelle
Journal:  Physiol Behav       Date:  2017-11-13

6.  Rodent ultrasonic vocalizations as biomarkers of future alcohol use: A predictive analytic approach.

Authors:  Nitish Mittal; W Todd Maddox; Timothy Schallert; Christine L Duvauchelle
Journal:  Cogn Affect Behav Neurosci       Date:  2018-02       Impact factor: 3.282

7.  Negative Affect-Associated USV Acoustic Characteristics Predict Future Excessive Alcohol Drinking and Alcohol Avoidance in Male P and NP Rats.

Authors:  James M Reno; Neha Thakore; Lawrence K Cormack; Timothy Schallert; Richard L Bell; W Todd Maddox; Christine L Duvauchelle
Journal:  Alcohol Clin Exp Res       Date:  2017-02-23       Impact factor: 3.455

8.  Response to: making WAAVES in the vocalization community: how big is the splash?

Authors:  James M Reno; Christine L Duvauchelle
Journal:  J Neurosci Methods       Date:  2013-10-01       Impact factor: 2.390

9.  Alcohol enhances unprovoked 22-28 kHz USVs and suppresses USV mean frequency in High Alcohol Drinking (HAD-1) male rats.

Authors:  Neha Thakore; James M Reno; Rueben A Gonzales; Timothy Schallert; Richard L Bell; W Todd Maddox; Christine L Duvauchelle
Journal:  Behav Brain Res       Date:  2016-01-21       Impact factor: 3.332

10.  Acoustilytix™: A Web-Based Automated Ultrasonic Vocalization Scoring Platform.

Authors:  Catherine B Ashley; Ryan D Snyder; James E Shepherd; Catalina Cervantes; Nitish Mittal; Sheila Fleming; Jaxon Bailey; Maisie D Nievera; Sharmin Islam Souleimanova; Bill Nyaoga; Lauren Lichtenfeld; Alicia R Chen; W Todd Maddox; Christine L Duvauchelle
Journal:  Brain Sci       Date:  2021-06-29
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