Literature DB >> 23828255

Adaptive smoothing as inference strategy: more specificity for unequally sized or neighbouring regions.

Marijke Welvaert1, Karsten Tabelow, Ruth Seurinck, Yves Rosseel.   

Abstract

Although spatial smoothing of fMRI data can serve multiple purposes, increasing the sensitivity of activation detection is probably its greatest benefit. However, this increased detection power comes with a loss of specificity when non-adaptive smoothing (i.e. the standard in most software packages) is used. Simulation studies and analysis of experimental data was performed using the R packages neuRosim and fmri. In these studies, we systematically investigated the effect of spatial smoothing on the power and number of false positives in two particular cases that are often encountered in fMRI research: (1) Single condition activation detection for regions that differ in size, and (2) multiple condition activation detection for neighbouring regions. Our results demonstrate that adaptive smoothing is superior in both cases because less false positives are introduced by the spatial smoothing process compared to standard Gaussian smoothing or FDR inference of unsmoothed data.

Mesh:

Year:  2013        PMID: 23828255     DOI: 10.1007/s12021-013-9196-z

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN: 1539-2791


  13 in total

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Authors:  Yingli Lu; Tianzi Jiang; Yufeng Zang
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2.  Detecting activation in fMRI data.

Authors:  K J Worsley
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3.  An evaluation of thresholding techniques in fMRI analysis.

Authors:  Brent R Logan; Daniel B Rowe
Journal:  Neuroimage       Date:  2004-05       Impact factor: 6.556

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Authors:  Karsten Tabelow; Jörg Polzehl; Henning U Voss; Vladimir Spokoiny
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5.  False discovery rate revisited: FDR and topological inference using Gaussian random fields.

Authors:  Justin R Chumbley; Karl J Friston
Journal:  Neuroimage       Date:  2008-05-23       Impact factor: 6.556

6.  How ignoring physiological noise can bias the conclusions from fMRI simulation results.

Authors:  M Welvaert; Y Rosseel
Journal:  J Neurosci Methods       Date:  2012-09-02       Impact factor: 2.390

Review 7.  The secret lives of experiments: methods reporting in the fMRI literature.

Authors:  Joshua Carp
Journal:  Neuroimage       Date:  2012-07-10       Impact factor: 6.556

8.  Mental rotation meets the motion aftereffect: the role of hV5/MT+ in visual mental imagery.

Authors:  Ruth Seurinck; Floris P de Lange; Erik Achten; Guy Vingerhoets
Journal:  J Cogn Neurosci       Date:  2010-06-03       Impact factor: 3.225

9.  Assessing the significance of focal activations using their spatial extent.

Authors:  K J Friston; K J Worsley; R S Frackowiak; J C Mazziotta; A C Evans
Journal:  Hum Brain Mapp       Date:  1994       Impact factor: 5.038

10.  Enhanced detection in brain activation maps using a multifiltering approach.

Authors:  J B Poline; B M Mazoyer
Journal:  J Cereb Blood Flow Metab       Date:  1994-07       Impact factor: 6.200

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  1 in total

Review 1.  Clinical application of advanced MR methods in children: points to consider.

Authors:  Marko Wilke; Samuel Groeschel; Anna Lorenzen; Sabine Rona; Martin U Schuhmann; Ulrike Ernemann; Ingeborg Krägeloh-Mann
Journal:  Ann Clin Transl Neurol       Date:  2018-09-27       Impact factor: 4.511

  1 in total

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