Literature DB >> 23812713

Intrinsically disordered protein threads through the bacterial outer-membrane porin OmpF.

Nicholas G Housden1, Jonathan T S Hopper, Natalya Lukoyanova, David Rodriguez-Larrea, Justyna A Wojdyla, Alexander Klein, Renata Kaminska, Hagan Bayley, Helen R Saibil, Carol V Robinson, Colin Kleanthous.   

Abstract

Porins are β-barrel outer-membrane proteins through which small solutes and metabolites diffuse that are also exploited during cell death. We have studied how the bacteriocin colicin E9 (ColE9) assembles a cytotoxic translocon at the surface of Escherichia coli that incorporates the trimeric porin OmpF. Formation of the translocon involved ColE9's unstructured N-terminal domain threading in opposite directions through two OmpF subunits, capturing its target TolB on the other side of the membrane in a fixed orientation that triggers colicin import. Thus, an intrinsically disordered protein can tunnel through the narrow pores of an oligomeric porin to deliver an epitope signal to the cell to initiate cell death.

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Year:  2013        PMID: 23812713      PMCID: PMC3856478          DOI: 10.1126/science.1237864

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  49 in total

1.  EMAN: semiautomated software for high-resolution single-particle reconstructions.

Authors:  S J Ludtke; P R Baldwin; W Chiu
Journal:  J Struct Biol       Date:  1999-12-01       Impact factor: 2.867

2.  Structural and mechanistic basis of immunity toward endonuclease colicins.

Authors:  C Kleanthous; U C Kühlmann; A J Pommer; N Ferguson; S E Radford; G R Moore; R James; A M Hemmings
Journal:  Nat Struct Biol       Date:  1999-03

Review 3.  Molecular basis of bacterial outer membrane permeability revisited.

Authors:  Hiroshi Nikaido
Journal:  Microbiol Mol Biol Rev       Date:  2003-12       Impact factor: 11.056

4.  The molecular architecture of axonemes revealed by cryoelectron tomography.

Authors:  Daniela Nicastro; Cindi Schwartz; Jason Pierson; Richard Gaudette; Mary E Porter; J Richard McIntosh
Journal:  Science       Date:  2006-08-18       Impact factor: 47.728

5.  XDS.

Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

Review 6.  Border crossings: colicins and transporters.

Authors:  Karen S Jakes; William A Cramer
Journal:  Annu Rev Genet       Date:  2012-08-28       Impact factor: 16.830

7.  Cell entry mechanism of enzymatic bacterial colicins: porin recruitment and the thermodynamics of receptor binding.

Authors:  Nicholas G Housden; Steven R Loftus; Geoffrey R Moore; Richard James; Colin Kleanthous
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-15       Impact factor: 11.205

8.  Crystal structures of the OmpF porin: function in a colicin translocon.

Authors:  Eiki Yamashita; Mariya V Zhalnina; Stanislav D Zakharov; Onkar Sharma; William A Cramer
Journal:  EMBO J       Date:  2008-07-17       Impact factor: 11.598

9.  Developments in the CCP4 molecular-graphics project.

Authors:  Liz Potterton; Stuart McNicholas; Eugene Krissinel; Jan Gruber; Kevin Cowtan; Paul Emsley; Garib N Murshudov; Serge Cohen; Anastassis Perrakis; Martin Noble
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26

10.  Mass spectrometry of intact membrane protein complexes.

Authors:  Arthur Laganowsky; Eamonn Reading; Jonathan T S Hopper; Carol V Robinson
Journal:  Nat Protoc       Date:  2013-03-07       Impact factor: 13.491

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  58 in total

Review 1.  Expanding the Range of Protein Function at the Far End of the Order-Structure Continuum.

Authors:  Virginia M Burger; Diego O Nolasco; Collin M Stultz
Journal:  J Biol Chem       Date:  2016-02-05       Impact factor: 5.157

2.  Can't you hear me knocking: contact-dependent competition and cooperation in bacteria.

Authors:  Allison M Jones; David A Low; Christopher S Hayes
Journal:  Emerg Top Life Sci       Date:  2017-04-21

Review 3.  The emerging role of native mass spectrometry in characterizing the structure and dynamics of macromolecular complexes.

Authors:  Elisabetta Boeri Erba; Carlo Petosa
Journal:  Protein Sci       Date:  2015-03-31       Impact factor: 6.725

4.  Mass spectrometric identification of intermediates in the O2-driven [4Fe-4S] to [2Fe-2S] cluster conversion in FNR.

Authors:  Jason C Crack; Andrew J Thomson; Nick E Le Brun
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-03       Impact factor: 11.205

5.  Generation of Charge-Reduced Ions of Membrane Protein Complexes for Native Ion Mobility Mass Spectrometry Studies.

Authors:  John W Patrick; Arthur Laganowsky
Journal:  J Am Soc Mass Spectrom       Date:  2019-03-18       Impact factor: 3.109

6.  Characterization of Membrane Protein-Lipid Interactions by Mass Spectrometry Ion Mobility Mass Spectrometry.

Authors:  Yang Liu; Xiao Cong; Wen Liu; Arthur Laganowsky
Journal:  J Am Soc Mass Spectrom       Date:  2016-12-06       Impact factor: 3.109

7.  Alpha-synuclein lipid-dependent membrane binding and translocation through the α-hemolysin channel.

Authors:  Philip A Gurnev; Thai Leong Yap; Candace M Pfefferkorn; Tatiana K Rostovtseva; Alexander M Berezhkovskii; Jennifer C Lee; V Adrian Parsegian; Sergey M Bezrukov
Journal:  Biophys J       Date:  2014-02-04       Impact factor: 4.033

8.  Transmembrane domain of surface-exposed outer membrane lipoprotein RcsF is threaded through the lumen of β-barrel proteins.

Authors:  Anna Konovalova; David H Perlman; Charles E Cowles; Thomas J Silhavy
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-29       Impact factor: 11.205

9.  Daring to be different: colicin N finds another way.

Authors:  Karen S Jakes
Journal:  Mol Microbiol       Date:  2014-03-19       Impact factor: 3.501

10.  Single-Cell, Time-Resolved Antimicrobial Effects of a Highly Cationic, Random Nylon-3 Copolymer on Live Escherichia coli.

Authors:  Heejun Choi; Saswata Chakraborty; Runhui Liu; Samuel H Gellman; James C Weisshaar
Journal:  ACS Chem Biol       Date:  2015-11-05       Impact factor: 5.100

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