Literature DB >> 23927812

Structures of oligomers of a peptide from β-amyloid.

Johnny D Pham1, Nicholas Chim, Celia W Goulding, James S Nowick.   

Abstract

Amyloid oligomers play a central role in Alzheimer's and other amyloid diseases, and yet the structures of these heterogeneous and unstable species are not well understood. To better understand the structures of oligomers formed by amyloid-β peptide (Aβ), we have incorporated a key amyloidogenic region of Aβ into a macrocyclic peptide that stabilizes oligomers and facilitates structural elucidation by X-ray crystallography. This paper reports the crystallographic structures of oligomers and oligomer assemblies formed by a macrocycle containing the Aβ(15-23) nonapeptide. The macrocycle forms hydrogen-bonded β-sheets that assemble into cruciform tetramers consisting of eight β-strands in a two-layered assembly. Three of the cruciform tetramers assemble into a triangular dodecamer. These oligomers further assemble in the lattice to form hexagonal pores. Molecular modeling studies suggest that the natural Aβ peptide can form similar oligomers and oligomer assemblies. The crystallographic and molecular modeling studies suggest the potential for interaction of the oligomers with cell membranes and provide insights into the role of oligomers in amyloid diseases.

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Year:  2013        PMID: 23927812      PMCID: PMC3787202          DOI: 10.1021/ja4068854

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  44 in total

Review 1.  Amyloidogenic protein-membrane interactions: mechanistic insight from model systems.

Authors:  Sara M Butterfield; Hilal A Lashuel
Journal:  Angew Chem Int Ed Engl       Date:  2010-08-02       Impact factor: 15.336

Review 2.  The toxic Aβ oligomer and Alzheimer's disease: an emperor in need of clothes.

Authors:  Iryna Benilova; Eric Karran; Bart De Strooper
Journal:  Nat Neurosci       Date:  2012-01-29       Impact factor: 24.884

3.  3D structure of Alzheimer's amyloid-beta(1-42) fibrils.

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Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-17       Impact factor: 11.205

4.  Cross-strand pairing and amyloid assembly.

Authors:  Yan Liang; Sai Venkatesh Pingali; Ashutosh S Jogalekar; James P Snyder; Pappannan Thiyagarajan; David G Lynn
Journal:  Biochemistry       Date:  2008-08-30       Impact factor: 3.162

5.  Out-of-register β-sheets suggest a pathway to toxic amyloid aggregates.

Authors:  Cong Liu; Minglei Zhao; Lin Jiang; Pin-Nan Cheng; Jiyong Park; Michael R Sawaya; Anna Pensalfini; Dawei Gou; Arnold J Berk; Charles G Glabe; James Nowick; David Eisenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-03       Impact factor: 11.205

6.  Distinct early folding and aggregation properties of Alzheimer amyloid-beta peptides Abeta40 and Abeta42: stable trimer or tetramer formation by Abeta42.

Authors:  Yun-Ru Chen; Charles G Glabe
Journal:  J Biol Chem       Date:  2006-06-29       Impact factor: 5.157

7.  Amyloid beta protein forms ion channels: implications for Alzheimer's disease pathophysiology.

Authors:  H Lin; R Bhatia; R Lal
Journal:  FASEB J       Date:  2001-11       Impact factor: 5.191

8.  Amyloid-β protein oligomerization and the importance of tetramers and dodecamers in the aetiology of Alzheimer's disease.

Authors:  Summer L Bernstein; Nicholas F Dupuis; Noel D Lazo; Thomas Wyttenbach; Margaret M Condron; Gal Bitan; David B Teplow; Joan-Emma Shea; Brandon T Ruotolo; Carol V Robinson; Michael T Bowers
Journal:  Nat Chem       Date:  2009-07       Impact factor: 24.427

9.  Amyloid fibril formation by A beta 16-22, a seven-residue fragment of the Alzheimer's beta-amyloid peptide, and structural characterization by solid state NMR.

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Journal:  Biochemistry       Date:  2000-11-14       Impact factor: 3.162

Review 10.  A beta oligomers - a decade of discovery.

Authors:  Dominic M Walsh; Dennis J Selkoe
Journal:  J Neurochem       Date:  2007-02-05       Impact factor: 5.372

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  17 in total

Review 1.  Elucidating the Structures of Amyloid Oligomers with Macrocyclic β-Hairpin Peptides: Insights into Alzheimer's Disease and Other Amyloid Diseases.

Authors:  Adam G Kreutzer; James S Nowick
Journal:  Acc Chem Res       Date:  2018-03-06       Impact factor: 22.384

2.  Effects of Familial Alzheimer's Disease Mutations on the Assembly of a β-Hairpin Peptide Derived from Aβ16-36.

Authors:  Kate J McKnelly; Adam G Kreutzer; William J Howitz; Katelyn Haduong; Stan Yoo; Candace Hart; James S Nowick
Journal:  Biochemistry       Date:  2022-02-25       Impact factor: 3.321

3.  Mutations and seeding of amylin fibril-like oligomers.

Authors:  Nathan A Bernhardt; Workalemahu M Berhanu; Ulrich H E Hansmann
Journal:  J Phys Chem B       Date:  2013-12-02       Impact factor: 2.991

4.  A Newcomer's Guide to Peptide Crystallography.

Authors:  Ryan K Spencer; James S Nowick
Journal:  Isr J Chem       Date:  2015-06-01       Impact factor: 3.333

5.  Amyloid β-Protein C-Terminal Fragments: Formation of Cylindrins and β-Barrels.

Authors:  Thanh D Do; Nichole E LaPointe; Rebecca Nelson; Pascal Krotee; Eric Y Hayden; Brittany Ulrich; Sarah Quan; Stuart C Feinstein; David B Teplow; David Eisenberg; Joan-Emma Shea; Michael T Bowers
Journal:  J Am Chem Soc       Date:  2016-01-06       Impact factor: 15.419

6.  Diversification of β-Augmentation Interactions between CDI Toxin/Immunity Proteins.

Authors:  Robert P Morse; Julia L E Willett; Parker M Johnson; Jing Zheng; Alfredo Credali; Angelina Iniguez; James S Nowick; Christopher S Hayes; Celia W Goulding
Journal:  J Mol Biol       Date:  2015-10-09       Impact factor: 5.469

Review 7.  Understanding and controlling amyloid aggregation with chirality.

Authors:  Alejandro R Foley; Jevgenij A Raskatov
Journal:  Curr Opin Chem Biol       Date:  2021-02-18       Impact factor: 8.972

Review 8.  Structure and Function of Alzheimer's Amyloid βeta Proteins from Monomer to Fibrils: A Mini Review.

Authors:  Nikhil Agrawal; Adam A Skelton
Journal:  Protein J       Date:  2019-08       Impact factor: 2.371

9.  Polymorphism of oligomers of a peptide from β-amyloid.

Authors:  Johnny D Pham; Borries Demeler; James S Nowick
Journal:  J Am Chem Soc       Date:  2014-03-26       Impact factor: 15.419

Review 10.  Misfolding of amyloidogenic proteins and their interactions with membranes.

Authors:  Annalisa Relini; Nadia Marano; Alessandra Gliozzi
Journal:  Biomolecules       Date:  2013-12-27
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