Literature DB >> 23805749

Molecular view on protein sorting into liquid-ordered membrane domains mediated by gangliosides and lipid anchors.

Djurre H de Jong, Cesar A Lopez, Siewert J Marrink.   

Abstract

We present results from coarse grain molecular dynamics simulations of mixed model membranes consisting of saturated and unsaturated lipids together with cholesterol, in which lipid-anchored membrane proteins are embedded. The membrane proteins studied are the peripherally bound H-Ras, N-Ras, and Hedgehog, and the transmembrane peptides WALP and LAT. We provide a molecular view on how the presence and nature of these lipid anchors affects partitioning of the proteins between liquid-ordered and liquid-disordered domains. In addition, we probed the role of the ganglioside lipid GM1 on the protein sorting, showing formation of GM1-protein nano-domains that act as shuttles between the differently ordered membrane regions.

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Year:  2013        PMID: 23805749     DOI: 10.1039/c2fd20086d

Source DB:  PubMed          Journal:  Faraday Discuss        ISSN: 1359-6640            Impact factor:   4.008


  37 in total

1.  Cholesterol modulates the dimer interface of the β₂-adrenergic receptor via cholesterol occupancy sites.

Authors:  Xavier Prasanna; Amitabha Chattopadhyay; Durba Sengupta
Journal:  Biophys J       Date:  2014-03-18       Impact factor: 4.033

2.  Interplay between Membrane Curvature and Cholesterol: Role of Palmitoylated Caveolin-1.

Authors:  Anjali Krishna; Durba Sengupta
Journal:  Biophys J       Date:  2018-12-01       Impact factor: 4.033

3.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

Authors:  Giray Enkavi; Matti Javanainen; Waldemar Kulig; Tomasz Róg; Ilpo Vattulainen
Journal:  Chem Rev       Date:  2019-03-12       Impact factor: 60.622

4.  Exploring the impact of proteins on the line tension of a phase-separating ternary lipid mixture.

Authors:  Asanga Bandara; Afra Panahi; George A Pantelopulos; Tetsuro Nagai; John E Straub
Journal:  J Chem Phys       Date:  2019-05-28       Impact factor: 3.488

5.  Introductory lecture: basic quantities in model biomembranes.

Authors:  John F Nagle
Journal:  Faraday Discuss       Date:  2013       Impact factor: 4.008

6.  Membrane-mediated regulation of the intrinsically disordered CD3ϵ cytoplasmic tail of the TCR.

Authors:  Cesar A López; Anurag Sethi; Byron Goldstein; Bridget S Wilson; S Gnanakaran
Journal:  Biophys J       Date:  2015-05-19       Impact factor: 4.033

7.  Understanding Membrane Domain-Partitioning Thermodynamics of Transmembrane Domains with Potential of Mean Force Calculations.

Authors:  Xubo Lin; Alemayehu A Gorfe
Journal:  J Phys Chem B       Date:  2019-01-24       Impact factor: 2.991

8.  The Ebola virus protein VP40 hexamer enhances the clustering of PI(4,5)P2 lipids in the plasma membrane.

Authors:  Jeevan B Gc; Bernard S Gerstman; Robert V Stahelin; Prem P Chapagain
Journal:  Phys Chem Chem Phys       Date:  2016-10-19       Impact factor: 3.676

9.  Gangliosides Destabilize Lipid Phase Separation in Multicomponent Membranes.

Authors:  Yang Liu; Jonathan Barnoud; Siewert J Marrink
Journal:  Biophys J       Date:  2019-09-06       Impact factor: 4.033

10.  Overview of simulation studies on the enzymatic activity and conformational dynamics of the GTPase Ras.

Authors:  Priyanka Prakash; Alemayehu A Gorfe
Journal:  Mol Simul       Date:  2014-03-19       Impact factor: 2.178

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