| Literature DB >> 23805288 |
Yu-Mei Wang1, Zu-Wang Liu, Jing-Bo Guo, Xiao-Fang Wang, Xin-Xin Zhao, Xuan Zheng.
Abstract
BACKGROUND: Many published data on the association between single nucleotide polymorphisms (SNPs) in the ESR1 gene and prostate cancer susceptibility are inconclusive. The aim of this Human Genome Epidemiology (HuGE) review and meta-analysis is to derive a more precise estimation of this relationship.Entities:
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Year: 2013 PMID: 23805288 PMCID: PMC3689664 DOI: 10.1371/journal.pone.0066999
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Flow chart of literature search and study selection.
Characteristics of included studies in this meta-analysis.
| First author [Ref] | Year | Country | Ethnicity | Number | Source | Sample | Genotype method | SNP ID | Alternate name | STROBE score | NOS scale | ||
| Case | Control | Case | Control | ||||||||||
| Modugno et al | 2001 | USA | Caucasian | 88 | 241 | HB | PB | Blood | PCR-SSCP | rs9340799 (A>G) | XbaI | 26 | 5/9 |
| rs2234693 (C>T) | PvuII | ||||||||||||
| Cancel-Tassin et al | 2003 | France | Caucasian | 96 | 96 | HB | PB | Blood | DHPLC | rs2077647 (T>C) | Codon 10 | 25 | 7/9 |
| rs746432 (G>C) | +261G>C | ||||||||||||
| rs1801132 (C>G) | Codon 325 | ||||||||||||
| rs2228480 (G>A) | Codon 594 | ||||||||||||
| Suzuki et al | 2003 | Japan | Asian | 101 | 114 | HB | HB | Blood | PCR-SSCP | rs2234693 (C>T) | PvuII | 26 | 6/9 |
| rs9340799 (A>G) | XbaI | ||||||||||||
| Tanaka et al | 2003 | USA | Asian | 115 | 200 | HB | PB | Tissue | DNA sequencing | rs2077647 (T>C) | Codon 10 | 26 | 7/9 |
| rs2234693 (C>T) | PvuII | ||||||||||||
| rs1801132 (C>G) | Codon 325 | ||||||||||||
| rs2228480 (G>A) | Codon 594 | ||||||||||||
| Fukatsu et al | 2004 | Japan | Asian | 147 | 266 | HB | HB | Tissue | PCR-SSCP | rs9340799 (A>G) | XbaI | 27 | 8/9 |
| rs2234693 (C>T) | PvuII | ||||||||||||
| Hernandez et al | 2006 | USA | Mixed | 598 | 1098 | HB | HB | Blood | TaqMan | rs9340799 (A>G) | XbaI | 26 | 6/9 |
| rs2234693 (C>T) | PvuII | ||||||||||||
| Onsory et al | 2008 | India | Asian | 100 | 100 | HB | HB | Tissue | PCR-RFLP | rs2234693 (C>T) | PvuII | 23 | 6/9 |
| Sobti et al | 2008 | India | Asian | 157 | 170 | HB | PB | Blood | PCR-RFLP | rs2234693 (C>T) | PvuII | 24 | 5/9 |
| Chae et al | 2009 | USA | Caucasian | 269 | 440 | HB | PB | Blood | TaqMan | rs1801132 (C>G) | Codon 325 | 26 | 7/9 |
| rs2077647 (T>C) | Codon 10 | ||||||||||||
| rs746432 (G>C) | +261G>C | ||||||||||||
| rs2228480 (G>A) | Codon 594 | ||||||||||||
| Gupta et al | 2010 | India | Asian | 157 | 170 | HB | PB | Blood | PCR-RFLP | rs2234693 (C>T) | PvuII | 24 | 8/9 |
| rs9340799 (A>G) | XbaI | ||||||||||||
| Sonoda et al | 2010 | Japan | Asian | 180 | 177 | PB | PB | Blood | TaqMan | rs2077647 (T>C) | Codon 10 | 25 | 8/9 |
| rs2234693 (C>T) | PvuII | ||||||||||||
| rs1801132 (C>G) | Codon 325 | ||||||||||||
| Sissung et al | 2011 | USA | Caucasian | 157 | 289 | HB | PB | Blood | PCR-RFLP | rs2234693 (C>T) | PvuII | 24 | 9/9 |
| rs9340799 (A>G) | XbaI | ||||||||||||
Ref = reference; PCR-RFLP = polymerase chain reaction-restriction fragment length polymorphism; PCR-SSCP = polymerase chain reaction-single strand conformation polymorphism; DHPLC = denaturing high performance liquid chromatography; HB = Hospital-based; PB = Population-based; NOS = Newcastle-Ottawa Scale.
Meta-analysis of the association between ESR1 PvuII (C>T) polymorphism and prostate cancer risk.
| Subgroups (sample sizes) | T allele vs. C allele (allele model) | TT + TC vs. CC (dominant model) | TT vs. CC + CT (recessive model) | TT vs. CC (homozygous model) | TT vs. CT (heterozygous model) | |||||||||||||||
| OR | 95%CI |
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| OR | 95%CI |
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| OR | 95%CI |
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| OR | 95%CI |
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| OR | 95%CI |
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| Overall (n = 11) | 1.10 | 0.91–1.33 | 0.332 | <0.001 | 1.05 | 0.91–1.21 | 0.478 | 0.157 | 1.21 | 0.87–1.69 | 0.255 | <0.001 | 1.26 | 0.85–1.86 | 0.256 | <0.001 | 1.19 | 0.87–1.61 | 0.277 | 0.002 |
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| Caucasians (n = 3) | 0.90 | 0.66–1.24 | 0.518 | 0.023 | 0.91 | 0.73–1.14 | 0.422 | 0.411 | 0.84 | 0.46–1.52 | 0.562 | 0.006 | 0.83 | 0.44–1.56 | 0.552 | 0.024 | 0.85 | 0.47–1.51 | 0.573 | 0.014 |
| Asians (n = 7) | 1.28 | 1.05–1.57 | 0.015 | 0.062 | 1.23 | 1.01–1.49 | 0.039 | 0.422 | 1.59 | 1.10–2.30 | 0.016 | 0.049 | 1.77 | 1.16–2.72 | 0.009 | 0.075 | 1.49 | 1.06–2.09 | 0.023 | 0.131 |
| Africans (n = 1) | 0.74 | 0.47–1.16 | 0.192 | - | 0.59 | 0.30–1.18 | 0.135 | - | 0.77 | 0.35–1.71 | 0.522 | - | 0.56 | 0.23–1.39 | 0.213 | - | 0.93 | 0.40–2.15 | 0.855 | - |
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| American (n = 5) | 0.89 | 0.73–1.09 | 0.274 | 0.073 | 0.89 | 0.73–1.08 | 0.227 | 0.523 | 0.86 | 0.60–1.25 | 0.438 | 0.033 | 0.81 | 0.54–1.22 | 0.318 | 0.078 | 0.89 | 0.62–1.28 | 0.537 | 0.065 |
| Japanese (n = 3) | 1.35 | 0.70–2.62 | 0.374 | 0.009 | 1.21 | 0.88–1.65 | 0.239 | 0.215 | 1.47 | 0.56–3.89 | 0.437 | 0.009 | 1.78 | 0.52–6.10 | 0.359 | 0.018 | 1.36 | 0.56–3.30 | 0.494 | 0.025 |
| Indian (n = 3) | 1.37 | 1.13–1.67 | 0.001 | 0.721 | 1.34 | 1.01–1.78 | 0.040 | 0.466 | 2.06 | 1.37–3.09 | <0.001 | 0.993 | 2.27 | 1.46–3.53 | <0.001 | 0.913 | 1.93 | 1.26–2.94 | 0.002 | 0.889 |
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| Population-based (n = 5) | 1.07 | 0.82–1.40 | 0.639 | 0.011 | 1.07 | 0.87–1.30 | 0.539 | 0.693 | 1.23 | 0.67–2.24 | 0.501 | 0.001 | 1.24 | 0.67–2.28 | 0.492 | 0.005 | 1.23 | 0.68–2.20 | 0.492 | 0.002 |
| Hospital-based (n = 6) | 1.14 | 0.84–1.54 | 0.413 | 0.001 | 1.04 | 0.85–1.27 | 0.696 | 0.024 | 1.20 | 0.78–1.84 | 0.408 | 0.009 | 1.28 | 0.71–2.31 | 0.410 | 0.003 | 1.14 | 0.80–1.62 | 0.481 | 0.080 |
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| PCR-RFLP (n = 4) | 1.14 | 0.78–1.68 | 0.499 | 0.002 | 1.20 | 0.93–1.55 | 0.168 | 0.151 | 1.36 | 0.57–3.21 | 0.489 | <0.001 | 1.47 | 0.61–3.57 | 0.391 | 0.001 | 1.28 | 0.57–2.90 | 0.549 | 0.001 |
| TaqMan (n = 3) | 0.90 | 0.78–1.04 | 0.144 | 0.376 | 0.90 | 0.73–1.12 | 0.343 | 0.385 | 0.88 | 0.70–1.09 | 0.244 | 0.744 | 0.82 | 0.61–1.09 | 0.162 | 0.398 | 0.90 | 0.71–1.14 | 0.401 | 0.956 |
| PCR-SSCP (n = 3) | 1.31 | 0.90–1.92 | 0.162 | 0.032 | 1.30 | 0.92–1.83 | 0.136 | 0.279 | 1.49 | 0.83–2.70 | 0.184 | 0.030 | 1.68 | 0.85–3.34 | 0.139 | 0.061 | 1.41 | 0.81–2.44 | 0.222 | 0.070 |
| direct DNA sequencing (n = 1) | 0.99 | 0.71–1.36 | 0.931 | - | 0.94 | 0.55–1.59 | 0.809 | - | 1.03 | 0.58–1.84 | 0.914 | - | 0.98 | 0.49–1.95 | 0.945 | - | 1.06 | 0.58–1.93 | 0.854 | - |
OR = odds ratios;
95%CI = 95% confidence interval;
P = P value of heterogeneity test;
= estimates for random effects model.
Figure 2Subgroup analysis by ethnicity of ORs with a random-effects model for associations between ESR1 PvuII (C>T) polymorphism and prostate cancer risk under dominant model (TT + TC vs. CC).
Figure 3Subgroup analysis by country of ORs with a random-effects model for associations between ESR1 PvuII (C>T) polymorphism and prostate cancer risk under dominant model (TT + TC vs. CC).
Meta-analysis of the association between ESR1 XbaI (A>G) polymorphism and prostate cancer risk.
| Subgroups (sample sizes) | G allele vs. A allele(allele model) | GG + AG vs. AA(dominant model) | GG vs. AA + AG(recessive model) | GG vs. AA(homozygous model) | GG vs. AG(heterozygous model) | |||||||||||||||
| OR | 95%CI |
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| OR | 95%CI |
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| OR | 95%CI |
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| OR | 95%CI |
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| OR | 95%CI |
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| Overall (n = 6) | 1.09 | 0.98–1.22 | 0.118 | 0.089 | 1.14 | 0.98–1.34 | 0.089 | 0.109 | 1.08 | 0.86–1.34 | 0.523 | 0.472 | 1.19 | 0.92–1.55 | 0.174 | 0.332 | 1.03 | 0.82–1.30 | 0.797 | 0693 |
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| Caucasians (n = 3) | 1.11 | 0.97–1.27 | 0.125 | 0.099 | 1.12 | 0.93–1.35 | 0.229 | 0.104 | 1.21 | 0.92–1.60 | 0.177 | 0.251 | 1.26 | 0.94–1.69 | 0.127 | 0.120 | 1.17 | 0.87–1.58 | 0.291 | 0.397 |
| Asians (n = 7) | 0.96 | 0.77–1.21 | 0.736 | 0.286 | 1.04 | 0.75–1.45 | 0.807 | 0.386 | 0.85 | 0.58–1.24 | 0.392 | 0.718 | 0.89 | 0.50–1.58 | 0.688 | 0.590 | 0.84 | 0.56–1.26 | 0.399 | 0.914 |
| Africans (n = 1) | 1.60 | 1.00–2.57 | 0.049 | - | 2.15 | 1.12–4.13 | 0.022 | - | 1.22 | 0.43–3.44 | 0.713 | - | 1.81 | 0.60–5.49 | 0.294 | - | 0.81 | 0.27–2.40 | 0.704 | - |
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| American (n = 3) | 1.14 | 1.00–1.30 | 0.045 | 0.079 | 1.18 | 0.99–1.40 | 0.072 | 0.044 | 1.21 | 0.93–1.59 | 0.162 | 0.429 | 1.29 | 0.97–1.71 | 0.084 | 0.201 | 1.14 | 0.86–1.52 | 0.361 | 0.521 |
| Japanese (n = 2) | 0.82 | 0.61–1.11 | 0.200 | 0.688 | 0.80 | 0.48–1.32 | 0.381 | 0.830 | 0.80 | 0.52–1.22 | 0.292 | 0.610 | 0.70 | 0.33–1.50 | 0.361 | 0.643 | 0.81 | 0.52–1.28 | 0.368 | 0.784 |
| Indian (n = 1) | 1.17 | 0.84–1.64 | 0.362 | - | 1.27 | 0.82–1.96 | 0.282 | - | 1.09 | 0.46–2.59 | 0.847 | - | 1.23 | 0.50–2.99 | 0.655 | - | 0.96 | 0.39–2.35 | 0.929 | - |
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| Population-based (n = 3) | 1.30 | 1.06–1.59 | 0.014 | 0.437 | 1.42 | 1.08–1.88 | 0.013 | 0.635 | 1.38 | 0.86–2.20 | 0.179 | 0.302 | 1.64 | 1.00–2.68 | 0.050 | 0.252 | 1.17 | 0.72–1.91 | 0.529 | 0.366 |
| Hospital-based (n = 3) | 1.02 | 0.89–1.17 | 0.794 | 0.127 | 1.04 | 0.86–1.25 | 0.721 | 0.113 | 1.00 | 0.78–1.29 | 0.992 | 0.578 | 1.06 | 0.79–1.44 | 0.688 | 0.523 | 0.99 | 0.76–1.29 | 0.962 | 0.664 |
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| PCR-RFLP (n = 2) | 1.34 | 1.05–72 | 0.019 | 0.238 | 1.45 | 1.04–2.02 | 0.027 | 0.354 | 1.64 | 0.90–2.99 | 0.110 | 0.204 | 1.94 | 1.04–3.64 | 0.039 | 0.155 | 1.39 | 0.74–2.60 | 0.300 | 0.261 |
| TaqMan (n = 1) | 1.07 | 0.92–1.25 | 0.357 | 0.078 | 1.08 | 0.88–1.32 | 0.461 | 0.029 | 1.31 | 0.83–1.54 | 0.436 | 0.887 | 1.15 | 0.83–1.60 | 0.404 | 0.405 | 1.10 | 0.80–1.53 | 0.554 | 0.557 |
| PCR-SSCP (n = 3) | 0.95 | 0.75–1.21 | 0.679 | 0.289 | 1.04 | 0.73–1.48 | 0.834 | 0.345 | 1.64 | 0.90–2.99 | 0.383 | 0.740 | 0.91 | 0.52–1.58 | 0.725 | 0.570 | 0.83 | 0.56–1.23 | 0.346 | 0.952 |
OR = odds ratios;
95%CI = 95% confidence interval;
Ph = P value of heterogeneity test;
= estimates for random effects model.
Figure 4Subgroup analysis by ethnicity of ORs with a random-effects model for associations between ESR1 XbaI (A>G) polymorphism and prostate cancer risk under dominant model (GG + AG vs. AA).
Figure 5Begger's funnel plot of the meta-analysis of ESR1 PvuII (A) and XbaI (B) polymorphisms with prostate cancer risk under dominant model.
Each point represents a separate study for the indicated association. Log[OR], natural logarithm of OR. Horizontal line, mean magnitude of the effect. Note: Funnel plot with pseudo 95% confidence limits was used.