Literature DB >> 23801749

The CpG island methylator phenotype: what's in a name?

Laura A E Hughes1, Veerle Melotte, Joachim de Schrijver, Michiel de Maat, Vincent T H B M Smit, Judith V M G Bovée, Pim J French, Piet A van den Brandt, Leo J Schouten, Tim de Meyer, Wim van Criekinge, Nita Ahuja, James G Herman, Matty P Weijenberg, Manon van Engeland.   

Abstract

Although the CpG island methylator phenotype (CIMP) was first identified and has been most extensively studied in colorectal cancer, the term "CIMP" has been repeatedly used over the past decade to describe CpG island promoter methylation in other tumor types, including bladder, breast, endometrial, gastric, glioblastoma (gliomas), hepatocellular, lung, ovarian, pancreatic, renal cell, and prostate cancers, as well as for leukemia, melanoma, duodenal adenocarninomas, adrenocortical carcinomas, and neuroblastomas. CIMP has been reported to be useful for predicting prognosis and response to treatment in a variety of tumor types, but it remains unclear whether or not CIMP is a universal phenomenon across human neoplasia or if there should be cancer-specific definitions of the phenotype. Recently, it was shown that somatic isocitrate dehydrogenase-1 (IDH1) mutations, frequently observed in gliomas, establish CIMP in primary human astrocytes by remodeling the methylome. Interestingly, somatic IDH1 and IDH2 mutations, and loss-of-function mutations in ten-eleven translocation (TET) methylcytosine dioxygenase-2 (TET2) associated with a hypermethylation phenotype, are also found in multiple enchondromas of patients with Ollier disease and Mafucci syndrome, and leukemia, respectively. These data provide the first clues for the elucidation of a molecular basis for CIMP. Although CIMP appears as a phenomenon that occurs in various cancer types, the definition is poorly defined and differs for each tumor. The current perspective discusses the use of the term CIMP in cancer, its significance in clinical practice, and future directions that may aid in identifying the true cause and definition of CIMP in different forms of human neoplasia.

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Year:  2013        PMID: 23801749     DOI: 10.1158/0008-5472.CAN-12-4306

Source DB:  PubMed          Journal:  Cancer Res        ISSN: 0008-5472            Impact factor:   12.701


  74 in total

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Authors:  Kar Men Mah; Joshua A Weiner
Journal:  Semin Cell Dev Biol       Date:  2017-08-01       Impact factor: 7.727

2.  Integrative analysis of DNA methylation and gene expression identified cervical cancer-specific diagnostic biomarkers.

Authors:  Wanxue Xu; Mengyao Xu; Longlong Wang; Wei Zhou; Rong Xiang; Yi Shi; Yunshan Zhang; Yongjun Piao
Journal:  Signal Transduct Target Ther       Date:  2019-12-13

3.  Review Article: The Role of Molecular Pathological Epidemiology in the Study of Neoplastic and Non-neoplastic Diseases in the Era of Precision Medicine.

Authors:  Shuji Ogino; Reiko Nishihara; Tyler J VanderWeele; Molin Wang; Akihiro Nishi; Paul Lochhead; Zhi Rong Qian; Xuehong Zhang; Kana Wu; Hongmei Nan; Kazuki Yoshida; Danny A Milner; Andrew T Chan; Alison E Field; Carlos A Camargo; Michelle A Williams; Edward L Giovannucci
Journal:  Epidemiology       Date:  2016-07       Impact factor: 4.822

4.  Loss of the polycomb mark from bivalent promoters leads to activation of cancer-promoting genes in colorectal tumors.

Authors:  Maria A Hahn; Arthur X Li; Xiwei Wu; Richard Yang; David A Drew; Daniel W Rosenberg; Gerd P Pfeifer
Journal:  Cancer Res       Date:  2014-05-01       Impact factor: 12.701

Review 5.  Etiologic field effect: reappraisal of the field effect concept in cancer predisposition and progression.

Authors:  Paul Lochhead; Andrew T Chan; Reiko Nishihara; Charles S Fuchs; Andrew H Beck; Edward Giovannucci; Shuji Ogino
Journal:  Mod Pathol       Date:  2014-06-13       Impact factor: 7.842

Review 6.  Defining, distinguishing and detecting the contribution of heterogeneous methylation to cancer heterogeneity.

Authors:  Thomas R Pisanic; Pornpat Athamanolap; Tza-Huei Wang
Journal:  Semin Cell Dev Biol       Date:  2016-08-28       Impact factor: 7.727

Review 7.  The epigenetic landscape of renal cancer.

Authors:  Mark R Morris; Farida Latif
Journal:  Nat Rev Nephrol       Date:  2016-11-28       Impact factor: 28.314

8.  Genome-wide CpG island methylation and intergenic demethylation propensities vary among different tumor sites.

Authors:  Seung-Tae Lee; Joseph L Wiemels
Journal:  Nucleic Acids Res       Date:  2015-10-12       Impact factor: 16.971

Review 9.  Epigenetic research in cancer epidemiology: trends, opportunities, and challenges.

Authors:  Mukesh Verma; Scott Rogers; Rao L Divi; Sheri D Schully; Stefanie Nelson; L Joseph Su; Sharon A Ross; Susan Pilch; Deborah M Winn; Muin J Khoury
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2013-12-10       Impact factor: 4.254

10.  D-2-Hydroxyglutarate Is Necessary and Sufficient for Isocitrate Dehydrogenase 1 Mutant-Induced MIR148A Promoter Methylation.

Authors:  Tie Li; Christopher D Cox; Byram H Ozer; Nhung T Nguyen; HuyTram N Nguyen; Thomas J Lai; Sichen Li; Fei Liu; Harley I Kornblum; Linda M Liau; Phioanh L Nghiemphu; Timothy F Cloughesy; Albert Lai
Journal:  Mol Cancer Res       Date:  2018-03-15       Impact factor: 5.852

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