Literature DB >> 23800988

Emerging mechanisms and consequences of calcium regulation of alternative splicing in neurons and endocrine cells.

Aleh Razanau1, Jiuyong Xie.   

Abstract

Alternative splicing contributes greatly to proteomic complexity. How it is regulated by external stimuli to sculpt cellular properties, particularly the highly diverse and malleable neuronal properties, is an underdeveloped area of emerging interest. A number of recent studies in neurons and endocrine cells have begun to shed light on its regulation by calcium signals. Some mechanisms include changes in the trans-acting splicing factors by phosphorylation, protein level, alternative pre-mRNA splicing, and nucleocytoplasmic redistribution of proteins to alter protein-RNA or protein-protein interactions, as well as modulation of chromatin states. Importantly, functional analyses of the control of specific exons/splicing factors in the brain point to a crucial role of this regulation in synaptic maturation, maintenance, and transmission. Furthermore, its deregulation has been implicated in the pathogenesis of neurological disorders, particularly epilepsy/seizure. Together, these studies have not only provided mechanistic insights into the regulation of alternative splicing by calcium signaling but also demonstrated its impact on neuron differentiation, function, and disease. This may also help our understanding of similar regulations in other types of cells.

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Year:  2013        PMID: 23800988     DOI: 10.1007/s00018-013-1390-5

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  108 in total

1.  Signaling to the nucleus by an L-type calcium channel-calmodulin complex through the MAP kinase pathway.

Authors:  R E Dolmetsch; U Pajvani; K Fife; J M Spotts; M E Greenberg
Journal:  Science       Date:  2001-10-12       Impact factor: 47.728

Review 2.  Calcium dysregulation and homeostasis of neural calcium in the molecular mechanisms of neurodegenerative diseases provide multiple targets for neuroprotection.

Authors:  Gregor Zündorf; Georg Reiser
Journal:  Antioxid Redox Signal       Date:  2010-10-06       Impact factor: 8.401

Review 3.  Spliceosome structure and function.

Authors:  Cindy L Will; Reinhard Lührmann
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-07-01       Impact factor: 10.005

4.  Regulation of the alternative splicing of sarcoplasmic reticulum Ca²⁺-ATPase1 (SERCA1) by phorbol 12-myristate 13-acetate (PMA) via a PKC pathway.

Authors:  Yimeng Zhao; Michinori Koebis; Satoshi Suo; Shigeo Ohno; Shoichi Ishiura
Journal:  Biochem Biophys Res Commun       Date:  2012-05-15       Impact factor: 3.575

Review 5.  Shuttling SR proteins: more than splicing factors.

Authors:  Laure Twyffels; Cyril Gueydan; Véronique Kruys
Journal:  FEBS J       Date:  2011-08-24       Impact factor: 5.542

6.  Rescuing Z+ agrin splicing in Nova null mice restores synapse formation and unmasks a physiologic defect in motor neuron firing.

Authors:  Matteo Ruggiu; Ruth Herbst; Natalie Kim; Marko Jevsek; John J Fak; Mary Anne Mann; Gerald Fischbach; Steven J Burden; Robert B Darnell
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-12       Impact factor: 11.205

7.  Phosphorylation and activation of Ca(2+)-calmodulin-dependent protein kinase IV by Ca(2+)-calmodulin-dependent protein kinase Ia kinase. Phosphorylation of threonine 196 is essential for activation.

Authors:  M A Selbert; K A Anderson; Q H Huang; E G Goldstein; A R Means; A M Edelman
Journal:  J Biol Chem       Date:  1995-07-21       Impact factor: 5.157

8.  Strong association of de novo copy number mutations with autism.

Authors:  Jonathan Sebat; B Lakshmi; Dheeraj Malhotra; Jennifer Troge; Christa Lese-Martin; Tom Walsh; Boris Yamrom; Seungtai Yoon; Alex Krasnitz; Jude Kendall; Anthony Leotta; Deepa Pai; Ray Zhang; Yoon-Ha Lee; James Hicks; Sarah J Spence; Annette T Lee; Kaija Puura; Terho Lehtimäki; David Ledbetter; Peter K Gregersen; Joel Bregman; James S Sutcliffe; Vaidehi Jobanputra; Wendy Chung; Dorothy Warburton; Mary-Claire King; David Skuse; Daniel H Geschwind; T Conrad Gilliam; Kenny Ye; Michael Wigler
Journal:  Science       Date:  2007-03-15       Impact factor: 47.728

9.  Cytogenetic and molecular characterization of A2BP1/FOX1 as a candidate gene for autism.

Authors:  Christa Lese Martin; Jacqueline A Duvall; Yesim Ilkin; Jason S Simon; M Gladys Arreaza; Kristin Wilkes; Ana Alvarez-Retuerto; Amy Whichello; Cynthia M Powell; Kathleen Rao; Edwin Cook; Daniel H Geschwind
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2007-10-05       Impact factor: 3.568

10.  Control of alternative splicing by forskolin through hnRNP K during neuronal differentiation.

Authors:  Wenguang Cao; Aleh Razanau; Dairong Feng; Vincent G Lobo; Jiuyong Xie
Journal:  Nucleic Acids Res       Date:  2012-06-08       Impact factor: 16.971

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  15 in total

1.  Calcium-mediated histone modifications regulate alternative splicing in cardiomyocytes.

Authors:  Alok Sharma; Hieu Nguyen; Cuiyu Geng; Melissa N Hinman; Guangbin Luo; Hua Lou
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-03       Impact factor: 11.205

Review 2.  Diverse regulation of 3' splice site usage.

Authors:  Muhammad Sohail; Jiuyong Xie
Journal:  Cell Mol Life Sci       Date:  2015-09-14       Impact factor: 9.261

3.  Histone hyperacetylation and exon skipping: a calcium-mediated dynamic regulation in cardiomyocytes.

Authors:  Alok Sharma; Hieu Nguyen; Lu Cai; Hua Lou
Journal:  Nucleus       Date:  2015       Impact factor: 4.197

Review 4.  Differential evolution of signal-responsive RNA elements and upstream factors that control alternative splicing.

Authors:  Jiuyong Xie
Journal:  Cell Mol Life Sci       Date:  2014-07-27       Impact factor: 9.261

Review 5.  Connecting the dots: chromatin and alternative splicing in EMT.

Authors:  Jessica A Warns; James R Davie; Archana Dhasarathy
Journal:  Biochem Cell Biol       Date:  2015-07-07       Impact factor: 3.626

6.  Genome-wide evolution of wobble base-pairing nucleotides of branchpoint motifs with increasing organismal complexity.

Authors:  Hai Nguyen; Urmi Das; Jiuyong Xie
Journal:  RNA Biol       Date:  2019-12-19       Impact factor: 4.652

Review 7.  Structural and functional characteristics of oestrogen receptor β splice variants: Implications for the ageing brain.

Authors:  C K Kim; A Torcaso; A Asimes; W C J Chung; T R Pak
Journal:  J Neuroendocrinol       Date:  2018-02       Impact factor: 3.627

8.  Rapid and Dynamic Alternative Splicing Impacts the Arabidopsis Cold Response Transcriptome.

Authors:  Cristiane P G Calixto; Wenbin Guo; Allan B James; Nikoleta A Tzioutziou; Juan Carlos Entizne; Paige E Panter; Heather Knight; Hugh G Nimmo; Runxuan Zhang; John W S Brown
Journal:  Plant Cell       Date:  2018-05-15       Impact factor: 11.277

9.  Evolutionarily emerged G tracts between the polypyrimidine tract and 3' AG are splicing silencers enriched in genes involved in cancer.

Authors:  Muhammad Sohail; Wenguang Cao; Niaz Mahmood; Mike Myschyshyn; Say Pham Hong; Jiuyong Xie
Journal:  BMC Genomics       Date:  2014-12-19       Impact factor: 3.969

10.  Spatio-temporal and dynamic regulation of neurofascin alternative splicing in mouse cerebellar neurons.

Authors:  Satoko Suzuki; Noriko Ayukawa; Chisa Okada; Masami Tanaka; Susumu Takekoshi; Yoko Iijima; Takatoshi Iijima
Journal:  Sci Rep       Date:  2017-09-12       Impact factor: 4.379

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