Literature DB >> 2377896

Four-dimensional heteronuclear triple-resonance NMR spectroscopy of interleukin-1 beta in solution.

L E Kay1, G M Clore, A Bax, A M Gronenborn.   

Abstract

A method is presented that dramatically improves the resolution of protein nuclear magnetic resonance (NMR) spectra by increasing their dimensionality to four. The power of this technique is demonstrated by the application of four-dimensional carbon-13--nitrogen-15 (13C-15N)--edited nuclear Overhauser effect (NOE) spectroscopy to interleukin-1 beta, a protein of 153 residues. The NOEs between NH and aliphatic protons are first spread out into a third dimension by the 15N chemical shift of the amide 15N atom and subsequently into a fourth dimension by the 13C chemical shift of the directly bonded 13C atoms. By this means ambiguities in the assignment of NOEs between NH and aliphatic protons that are still present in the three-dimensional 15N-edited NOE spectrum due to extensive chemical shift overlap and degeneracy of aliphatic resonances are completely removed. Consequently, many more approximate interproton distance restraints can be obtained from the NOE data than was heretofore possible, thereby expanding the horizons of three-dimensional structure determination by NMR to larger proteins.

Entities:  

Mesh:

Substances:

Year:  1990        PMID: 2377896     DOI: 10.1126/science.2377896

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  68 in total

1.  Chemical shift-dependent apparent scalar couplings: an alternative concept of chemical shift monitoring in multi-dimensional NMR experiments.

Authors:  Witek Kwiatkowski; Roland Riek
Journal:  J Biomol NMR       Date:  2003-04       Impact factor: 2.835

2.  Solution structure of the epsin N-terminal homology (ENTH) domain of human epsin.

Authors:  Seizo Koshiba; Takanori Kigawa; Akira Kikuchi; Shigeyuki Yokoyama
Journal:  J Struct Funct Genomics       Date:  2002

3.  Solution structure of a putative ribosome binding protein from Mycoplasma pneumoniae and comparison to a distant homolog.

Authors:  Seth M Rubin; Jeffrey G Pelton; Hisao Yokota; Rosalind Kim; David E Wemmer
Journal:  J Struct Funct Genomics       Date:  2003

4.  Flexibility in the P2 domain of the HIV-1 Gag polyprotein.

Authors:  John L Newman; Eric W Butcher; Dipti T Patel; Yelena Mikhaylenko; Michael F Summers
Journal:  Protein Sci       Date:  2004-07-06       Impact factor: 6.725

5.  A geometric arrangement algorithm for structure determination of symmetric protein homo-oligomers from NOEs and RDCs.

Authors:  Jeffrey W Martin; Anthony K Yan; Chris Bailey-Kellogg; Pei Zhou; Bruce R Donald
Journal:  J Comput Biol       Date:  2011-10-28       Impact factor: 1.479

6.  Accurate protein structure modeling using sparse NMR data and homologous structure information.

Authors:  James M Thompson; Nikolaos G Sgourakis; Gaohua Liu; Paolo Rossi; Yuefeng Tang; Jeffrey L Mills; Thomas Szyperski; Gaetano T Montelione; David Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-04       Impact factor: 11.205

7.  Binding of calmodulin to the HIV-1 matrix protein triggers myristate exposure.

Authors:  Ruba H Ghanam; Timothy F Fernandez; Emily L Fledderman; Jamil S Saad
Journal:  J Biol Chem       Date:  2010-10-18       Impact factor: 5.157

8.  NMR assignments, secondary structure, and global fold of calerythrin, an EF-hand calcium-binding protein from Saccharopolyspora erythraea.

Authors:  H Aitio; A Annila; S Heikkinen; E Thulin; T Drakenberg; I Kilpeläinen
Journal:  Protein Sci       Date:  1999-12       Impact factor: 6.725

9.  Structural characterization of Lyn-SH3 domain in complex with a herpesviral protein reveals an extended recognition motif that enhances binding affinity.

Authors:  Finn Bauer; Kristian Schweimer; Heike Meiselbach; Silke Hoffmann; Paul Rösch; Heinrich Sticht
Journal:  Protein Sci       Date:  2005-09-09       Impact factor: 6.725

10.  1H(C) and 1H(N) total NOE correlations in a single 3D NMR experiment. 15N and 13C time-sharing in t1 and t2 dimensions for simultaneous data acquisition.

Authors:  Youlin Xia; Adelinda Yee; Cheryl H Arrowsmith; Xiaolian Gao
Journal:  J Biomol NMR       Date:  2003-11       Impact factor: 2.835

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.