Literature DB >> 23756340

The H2A/H2B-like histone-fold domain proteins at the crossroad between chromatin and different DNA metabolisms.

Nerina Gnesutta1, Marco Nardini, Roberto Mantovani.   

Abstract

Core histones are the building block of chromatin and among the most highly conserved proteins in eukaryotes. The related "deviant" histones share the histone-fold domain, and serve various roles in DNA metabolism. We provide here a structural and functional outlook of H2A/H2B-like deviant histones in transcription, replication and remodeling.

Keywords:  H2A/H2B; NC2; NF-Y; TAF4/12; chromatin; chromatin remodeling complex; histone-fold; nucleosome; posttranslational modifications; transcription factors

Mesh：

Substances：

Year:  2013        PMID： 23756340      PMCID： PMC4042584          DOI： 10.4161/trns.25002

Source DB:  PubMed          Journal:  Transcription        ISSN： 2154-1272


  32 in total

1.  The histone-fold protein complex CHRAC-15/17 enhances nucleosome sliding and assembly mediated by ACF.

Authors:  Iwao Kukimoto; Sarah Elderkin; Margaret Grimaldi; Thomas Oelgeschläger; Patrick D Varga-Weisz
Journal:  Mol Cell       Date:  2004-01-30       Impact factor: 17.970

2.  The NC2 alpha and beta subunits play different roles in vivo.

Authors:  Sandrine Creton; Jesper Q Svejstrup; Martine A Collart
Journal:  Genes Dev       Date:  2002-12-15       Impact factor: 11.361

Review 3.  The promiscuous life of plant NUCLEAR FACTOR Y transcription factors.

Authors:  Katia Petroni; Roderick W Kumimoto; Nerina Gnesutta; Valentina Calvenzani; Monica Fornari; Chiara Tonelli; Ben F Holt; Roberto Mantovani
Journal:  Plant Cell       Date:  2012-12-28       Impact factor: 11.277

4.  NF-Y recruitment of TFIID, multiple interactions with histone fold TAF(II)s.

Authors:  Mattia Frontini; Carol Imbriano; Alberto diSilvio; Brendan Bell; Alessia Bogni; Christophe Romier; Dino Moras; Laszlo Tora; Irwin Davidson; Roberto Mantovani
Journal:  J Biol Chem       Date:  2001-10-31       Impact factor: 5.157

5.  Crystal structure of negative cofactor 2 recognizing the TBP-DNA transcription complex.

Authors:  K Kamada; F Shu; H Chen; S Malik; G Stelzer; R G Roeder; M Meisterernst; S K Burley
Journal:  Cell       Date:  2001-07-13       Impact factor: 41.582

6.  The architecture of human general transcription factor TFIID core complex.

Authors:  Christoph Bieniossek; Gabor Papai; Christiane Schaffitzel; Frederic Garzoni; Maxime Chaillet; Elisabeth Scheer; Petros Papadopoulos; Laszlo Tora; Patrick Schultz; Imre Berger
Journal:  Nature       Date:  2013-01-06       Impact factor: 49.962

7.  Crystal structure of a subcomplex of human transcription factor TFIID formed by TATA binding protein-associated factors hTAF4 (hTAF(II)135) and hTAF12 (hTAF(II)20).

Authors:  Sebastiaan Werten; André Mitschler; Christophe Romier; Yann-Gaël Gangloff; Sylvie Thuault; Irwin Davidson; Dino Moras
Journal:  J Biol Chem       Date:  2002-09-16       Impact factor: 5.157

8.  Sequence-specific transcription factor NF-Y displays histone-like DNA binding and H2B-like ubiquitination.

Authors:  Marco Nardini; Nerina Gnesutta; Giacomo Donati; Raffaella Gatta; Claudia Forni; Andrea Fossati; Clemens Vonrhein; Dino Moras; Christophe Romier; Martino Bolognesi; Roberto Mantovani
Journal:  Cell       Date:  2013-01-17       Impact factor: 41.582

9.  Human TFIID binds to core promoter DNA in a reorganized structural state.

Authors:  Michael A Cianfrocco; George A Kassavetis; Patricia Grob; Jie Fang; Tamar Juven-Gershon; James T Kadonaga; Eva Nogales
Journal:  Cell       Date:  2013-01-17       Impact factor: 41.582

10.  Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors.

Authors:  Jie Wang; Jiali Zhuang; Sowmya Iyer; XinYing Lin; Troy W Whitfield; Melissa C Greven; Brian G Pierce; Xianjun Dong; Anshul Kundaje; Yong Cheng; Oliver J Rando; Ewan Birney; Richard M Myers; William S Noble; Michael Snyder; Zhiping Weng
Journal:  Genome Res       Date:  2012-09       Impact factor: 9.043
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  8 in total

Review 1.  Quantitative proteomic analysis of histone modifications.

Authors:  He Huang; Shu Lin; Benjamin A Garcia; Yingming Zhao
Journal:  Chem Rev       Date:  2015-02-17       Impact factor: 60.622

2.  Recurrent somatic mutations affecting B-cell receptor signaling pathway genes in follicular lymphoma.

Authors:  Kilannin Krysiak; Felicia Gomez; Brian S White; Matthew Matlock; Christopher A Miller; Lee Trani; Catrina C Fronick; Robert S Fulton; Friederike Kreisel; Amanda F Cashen; Kenneth R Carson; Melissa M Berrien-Elliott; Nancy L Bartlett; Malachi Griffith; Obi L Griffith; Todd A Fehniger
Journal:  Blood       Date:  2016-11-14       Impact factor: 22.113

3.  Antagonistic controls of chromatin and mRNA start site selection by Tup family corepressors and the CCAAT-binding factor.

Authors:  Ryuta Asada; Naomichi Takemata; Charles S Hoffman; Kunihiro Ohta; Kouji Hirota
Journal:  Mol Cell Biol       Date:  2014-12-22       Impact factor: 4.272

4.  Arabidopsis DPB3-1, a DREB2A interactor, specifically enhances heat stress-induced gene expression by forming a heat stress-specific transcriptional complex with NF-Y subunits.

Authors:  Hikaru Sato; Junya Mizoi; Hidenori Tanaka; Kyonosin Maruyama; Feng Qin; Yuriko Osakabe; Kyoko Morimoto; Teppei Ohori; Kazuya Kusakabe; Maika Nagata; Kazuo Shinozaki; Kazuko Yamaguchi-Shinozaki
Journal:  Plant Cell       Date:  2014-12-09       Impact factor: 11.277

5.  POLE3-POLE4 Is a Histone H3-H4 Chaperone that Maintains Chromatin Integrity during DNA Replication.

Authors:  Roberto Bellelli; Ondrej Belan; Valerie E Pye; Camille Clement; Sarah L Maslen; J Mark Skehel; Peter Cherepanov; Genevieve Almouzni; Simon J Boulton
Journal:  Mol Cell       Date:  2018-09-11       Impact factor: 17.970

6.  Structural Basis of Inhibition of the Pioneer Transcription Factor NF-Y by Suramin.

Authors:  Valentina Nardone; Antonio Chaves-Sanjuan; Michela Lapi; Cristina Airoldi; Andrea Saponaro; Sebastiano Pasqualato; Diletta Dolfini; Carlo Camilloni; Andrea Bernardini; Nerina Gnesutta; Roberto Mantovani; Marco Nardini
Journal:  Cells       Date:  2020-10-29       Impact factor: 6.600

Review 7.  The replisome guides nucleosome assembly during DNA replication.

Authors:  Wenshuo Zhang; Jianxun Feng; Qing Li
Journal:  Cell Biosci       Date:  2020-03-12       Impact factor: 7.133

8.  Dpb4 promotes resection of DNA double-strand breaks and checkpoint activation by acting in two different protein complexes.

Authors:  Erika Casari; Elisa Gobbini; Marco Gnugnoli; Marco Mangiagalli; Michela Clerici; Maria Pia Longhese
Journal:  Nat Commun       Date:  2021-08-06       Impact factor: 14.919
  8 in total

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