| Literature DB >> 23750121 |
Irene Pichler1, Fabiola Del Greco M, Martin Gögele, Christina M Lill, Lars Bertram, Chuong B Do, Nicholas Eriksson, Tatiana Foroud, Richard H Myers, Michael Nalls, Margaux F Keller, Beben Benyamin, John B Whitfield, Peter P Pramstaller, Andrew A Hicks, John R Thompson, Cosetta Minelli.
Abstract
BACKGROUND: Although levels of iron are known to be increased in the brains of patients with Parkinson disease (PD), epidemiological evidence on a possible effect of iron blood levels on PD risk is inconclusive, with effects reported in opposite directions. Epidemiological studies suffer from problems of confounding and reverse causation, and mendelian randomization (MR) represents an alternative approach to provide unconfounded estimates of the effects of biomarkers on disease. We performed a MR study where genes known to modify iron levels were used as instruments to estimate the effect of iron on PD risk, based on estimates of the genetic effects on both iron and PD obtained from the largest sample meta-analyzed to date. METHODS ANDEntities:
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Year: 2013 PMID: 23750121 PMCID: PMC3672214 DOI: 10.1371/journal.pmed.1001462
Source DB: PubMed Journal: PLoS Med ISSN: 1549-1277 Impact factor: 11.069
Figure 1Graphical representation of the MR approach, with all estimates used to derive the final MR estimate.
*Reported is the allele that increases iron levels, together with its frequency (AF). **This corresponds approximately to an OR per unit µg/dl increase in iron of 0.997 (95%CI 0.994–0.999), that is 0.3% (0.1%–0.6%) relative reduction in PD risk per 1 µg/dl increase in iron.
Characteristics of the studies included for the gene–iron and gene–PD associations.
| Data Source |
| Type of Study | Maximum Sample Size |
|
| |||
| GIS Consortium | 10 | GWA | 21,567 |
|
| |||
| PDGene database | 9 | Candidate gene studies ( | 2,384 cases; 6,908 controls |
| PD GWAS Consortium | 5 | GWA | 4,238 cases; 4,239 controls |
| 23andMe | 1 | GWA | 4,127 cases; 62,037 controls |
| IPDGC | 4 | GWA | 4,258 cases; 10,152 controls |
| IPDGC | 5 | Immunochip genotyping | 5,802 cases; 5,556 controls |
Details on individual datasets are reported in Text S1 and in Tables S1 and S2.
Unpublished data. The original sample size was 22,444, but genotype and phenotype data were available only for 21,567.
23andMe: slightly expanded version of the cohort used in [23].
IPDGC: USA-NIA and USA-dbGAP studies were not included in our analysis due to overlap with PD GWAS Consortium; the Icelandic dataset was not available for analysis.
Figure 2Forest plot of the MR estimates from the three instruments.
The size of the squares is proportional to the precision of the MR estimates for each polymorphism, with the horizontal lines indicating their 95% confidence intervals. The combined MR estimate is represented by the centre of the diamond, with the lateral tips indicating its 95% confidence interval. The solid vertical line is the line of no effect.