Literature DB >> 23744963

Recruitment and biological consequences of histone modification of H3K27me3 and H3K9me3.

Joomyeong Kim1, Hana Kim.   

Abstract

Two histone marks, H3K27me3 and H3K9me3, are well known for their repressive roles in the genic and nongenic regions of metazoan genomes. Several protein complexes are known to be responsible for generating these marks, including polycomb repression complex 2 and several H3K9 methylases. Recent studies have shown that the targeting of these histone-modifying complexes within mammalian genomes may be mediated through several DNA-binding proteins, including AEBP2, JARID2, and YY1. In this review, we discuss the potential targeting mechanisms in light of the recent results that have been derived from genome-wide chromatin immunoprecipitation sequencing data and the in vivo functions of these two histone marks in light of the results derived from mouse and human genetic studies.

Entities:  

Keywords:  AEBP2; H3K27me3; H3K9me3; JARID2; PRC2; YY1

Mesh:

Substances:

Year:  2012        PMID: 23744963      PMCID: PMC3747788          DOI: 10.1093/ilar.53.3-4.232

Source DB:  PubMed          Journal:  ILAR J        ISSN: 1084-2020


  71 in total

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Journal:  EMBO J       Date:  2004-02-05       Impact factor: 11.598

2.  The long noncoding RNA Kcnq1ot1 organises a lineage-specific nuclear domain for epigenetic gene silencing.

Authors:  Lisa Redrup; Miguel R Branco; Elizabeth R Perdeaux; Christel Krueger; Annabelle Lewis; Fátima Santos; Takashi Nagano; Bradley S Cobb; Peter Fraser; Wolf Reik
Journal:  Development       Date:  2009-01-14       Impact factor: 6.868

3.  Multiple YY1 and CTCF binding sites in imprinting control regions.

Authors:  Joomyeong Kim
Journal:  Epigenetics       Date:  2008 May-Jun       Impact factor: 4.528

4.  SetDB1 contributes to repression of genes encoding developmental regulators and maintenance of ES cell state.

Authors:  Steve Bilodeau; Michael H Kagey; Garrett M Frampton; Peter B Rahl; Richard A Young
Journal:  Genes Dev       Date:  2009-11-01       Impact factor: 11.361

5.  A Polycomb group protein complex with sequence-specific DNA-binding and selective methyl-lysine-binding activities.

Authors:  Tetyana Klymenko; Bernadett Papp; Wolfgang Fischle; Thomas Köcher; Malgorzata Schelder; Cornelia Fritsch; Brigitte Wild; Matthias Wilm; Jürg Müller
Journal:  Genes Dev       Date:  2006-04-17       Impact factor: 11.361

6.  Haploinsufficiency of the murine polycomb gene Suz12 results in diverse malformations of the brain and neural tube.

Authors:  Xavier Miró; Xunlei Zhou; Susann Boretius; Thomas Michaelis; Christian Kubisch; Gonzalo Alvarez-Bolado; Peter Gruss
Journal:  Dis Model Mech       Date:  2009-06-17       Impact factor: 5.758

7.  Jarid2/Jumonji coordinates control of PRC2 enzymatic activity and target gene occupancy in pluripotent cells.

Authors:  Jamy C Peng; Anton Valouev; Tomek Swigut; Junmei Zhang; Yingming Zhao; Arend Sidow; Joanna Wysocka
Journal:  Cell       Date:  2009-12-24       Impact factor: 41.582

8.  GC-rich sequence elements recruit PRC2 in mammalian ES cells.

Authors:  Eric M Mendenhall; Richard P Koche; Thanh Truong; Vicky W Zhou; Biju Issac; Andrew S Chi; Manching Ku; Bradley E Bernstein
Journal:  PLoS Genet       Date:  2010-12-09       Impact factor: 5.917

9.  Aebp2 as an epigenetic regulator for neural crest cells.

Authors:  Hana Kim; Keunsoo Kang; Muhammad B Ekram; Tae-Young Roh; Joomyeong Kim
Journal:  PLoS One       Date:  2011-09-19       Impact factor: 3.240

10.  Characterization of the contradictory chromatin signatures at the 3' exons of zinc finger genes.

Authors:  Kimberly R Blahnik; Lei Dou; Lorigail Echipare; Sushma Iyengar; Henriette O'Geen; Erica Sanchez; Yongjun Zhao; Marco A Marra; Martin Hirst; Joseph F Costello; Ian Korf; Peggy J Farnham
Journal:  PLoS One       Date:  2011-02-15       Impact factor: 3.240

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  40 in total

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Authors:  Teresa Otto; Joachim Fandrey
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Review 2.  Post-transcriptional gene silencing, transcriptional gene silencing and human immunodeficiency virus.

Authors:  Catalina Méndez; Chantelle L Ahlenstiel; Anthony D Kelleher
Journal:  World J Virol       Date:  2015-08-12

3.  Introduction: The use of animals models to advance epigenetic science.

Authors:  Dana C Dolinoy; Christopher Faulk
Journal:  ILAR J       Date:  2012

4.  Functional Proteomic Analysis of Repressive Histone Methyltransferase Complexes Reveals ZNF518B as a G9A Regulator.

Authors:  Verena K Maier; Caitlin M Feeney; Jordan E Taylor; Amanda L Creech; Jana W Qiao; Attila Szanto; Partha P Das; Nicholas Chevrier; Catherine Cifuentes-Rojas; Stuart H Orkin; Steven A Carr; Jacob D Jaffe; Philipp Mertins; Jeannie T Lee
Journal:  Mol Cell Proteomics       Date:  2015-02-13       Impact factor: 5.911

Review 5.  Interplay between transcriptional control and chromatin regulation in the oligodendrocyte lineage.

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Review 6.  Mechano-modulation of nuclear events regulating oligodendrocyte progenitor gene expression.

Authors:  Eric Tsai; Patrizia Casaccia
Journal:  Glia       Date:  2019-02-08       Impact factor: 7.452

Review 7.  Role of H3K9me3 heterochromatin in cell identity establishment and maintenance.

Authors:  Dario Nicetto; Kenneth S Zaret
Journal:  Curr Opin Genet Dev       Date:  2019-05-16       Impact factor: 5.578

8.  Epigenetic mechanisms underlying NMDA receptor hypofunction in the prefrontal cortex of juvenile animals in the MAM model for schizophrenia.

Authors:  Yelena Gulchina; Song-Jun Xu; Melissa A Snyder; Felice Elefant; Wen-Jun Gao
Journal:  J Neurochem       Date:  2017-09-05       Impact factor: 5.372

9.  Epigenetic therapy overcomes treatment resistance in T cell prolymphocytic leukemia.

Authors:  Zainul S Hasanali; Bikramajit Singh Saroya; August Stuart; Sara Shimko; Juanita Evans; Mithun Vinod Shah; Kamal Sharma; Violetta V Leshchenko; Samir Parekh; Thomas P Loughran; Elliot M Epner
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10.  AEBP2 as a transcriptional activator and its role in cell migration.

Authors:  Hana Kim; Muhammad B Ekram; Arundhati Bakshi; Joomyeong Kim
Journal:  Genomics       Date:  2014-11-28       Impact factor: 5.736

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