Literature DB >> 25451679

AEBP2 as a transcriptional activator and its role in cell migration.

Hana Kim1, Muhammad B Ekram1, Arundhati Bakshi1, Joomyeong Kim2.   

Abstract

Aebp2 encodes an evolutionarily conserved zinc finger protein that has not been well studied so far, yet recent studies indicated that this gene is closely associated with the Polycomb Repressive Complex 2 (PRC2). Thus, the current study characterized the basic aspects of this gene, including alternative promoters and protein isoforms. According to the results, Aebp2 is controlled through three alternative promoters, deriving three different transcripts encoding the embryonic (32 kDa) and somatic (52 kDa) forms. Chromatin Immuno-Precipitation (ChIP) experiments revealed that AEBP2 binds to its own promoter as well as the promoters of Jarid2 and Snai2. While the embryonic form acts as a transcriptional repressor for Snai2, the somatic form functions as a transcriptional activator for Jarid2, Aebp2 and Snai2. Cell migration assays also demonstrated that the Aebp2 somatic form has an enhancing activity in cell migration. This is consistent with the functional association of Aebp2 with migratory neural crest cells. These results suggest that the two protein isoforms of AEBP2 may have opposite functions for the PcG target genes, and may play significant roles in cell migration during development.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Aebp2; Cell migration; Neural crest cells; Polycomb Repressive Complex 2

Mesh:

Substances:

Year:  2014        PMID: 25451679      PMCID: PMC4314425          DOI: 10.1016/j.ygeno.2014.11.007

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  28 in total

1.  Cell migration and invasion assays.

Authors:  Aline Valster; Nhan L Tran; Mitsutoshi Nakada; Michael E Berens; Amanda Y Chan; Marc Symons
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2.  Polycomb complexes repress developmental regulators in murine embryonic stem cells.

Authors:  Laurie A Boyer; Kathrin Plath; Julia Zeitlinger; Tobias Brambrink; Lea A Medeiros; Tong Ihn Lee; Stuart S Levine; Marius Wernig; Adriana Tajonar; Mridula K Ray; George W Bell; Arie P Otte; Miguel Vidal; David K Gifford; Richard A Young; Rudolf Jaenisch
Journal:  Nature       Date:  2006-04-19       Impact factor: 49.962

3.  A bivalent chromatin structure marks key developmental genes in embryonic stem cells.

Authors:  Bradley E Bernstein; Tarjei S Mikkelsen; Xiaohui Xie; Michael Kamal; Dana J Huebert; James Cuff; Ben Fry; Alex Meissner; Marius Wernig; Kathrin Plath; Rudolf Jaenisch; Alexandre Wagschal; Robert Feil; Stuart L Schreiber; Eric S Lander
Journal:  Cell       Date:  2006-04-21       Impact factor: 41.582

4.  Suz12 binds to silenced regions of the genome in a cell-type-specific manner.

Authors:  Sharon L Squazzo; Henriette O'Geen; Vitalina M Komashko; Sheryl R Krig; Victor X Jin; Sung-wook Jang; Raphael Margueron; Danny Reinberg; Roland Green; Peggy J Farnham
Journal:  Genome Res       Date:  2006-06-02       Impact factor: 9.043

Review 5.  Genome regulation by polycomb and trithorax proteins.

Authors:  Bernd Schuettengruber; Daniel Chourrout; Michel Vervoort; Benjamin Leblanc; Giacomo Cavalli
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

Review 6.  A gene regulatory network orchestrates neural crest formation.

Authors:  Tatjana Sauka-Spengler; Marianne Bronner-Fraser
Journal:  Nat Rev Mol Cell Biol       Date:  2008-06-04       Impact factor: 94.444

7.  A comparison of the migration patterns of normal and malignant cells in two assay systems.

Authors:  J Varani; W Orr; P A Ward
Journal:  Am J Pathol       Date:  1978-01       Impact factor: 4.307

8.  Identification of clustered YY1 binding sites in imprinting control regions.

Authors:  Jeong Do Kim; Angela K Hinz; Anne Bergmann; Jennifer M Huang; Ivan Ovcharenko; Lisa Stubbs; Joomyeong Kim
Journal:  Genome Res       Date:  2006-06-07       Impact factor: 9.043

9.  Functional dissection of a eukaryotic transcriptional activator protein, GCN4 of yeast.

Authors:  I A Hope; K Struhl
Journal:  Cell       Date:  1986-09-12       Impact factor: 41.582

10.  AEBP2 as a potential targeting protein for Polycomb Repression Complex PRC2.

Authors:  Hana Kim; Keunsoo Kang; Joomyeong Kim
Journal:  Nucleic Acids Res       Date:  2009-03-17       Impact factor: 16.971

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  6 in total

Review 1.  DNA binding by polycomb-group proteins: searching for the link to CpG islands.

Authors:  Brady M Owen; Chen Davidovich
Journal:  Nucleic Acids Res       Date:  2022-05-20       Impact factor: 19.160

2.  A novel form of JARID2 is required for differentiation in lineage-committed cells.

Authors:  Diaa Al-Raawi; Rhian Jones; Susanne Wijesinghe; John Halsall; Marija Petric; Sally Roberts; Neil A Hotchin; Aditi Kanhere
Journal:  EMBO J       Date:  2018-12-20       Impact factor: 11.598

3.  The Dynamic Partnership of Polycomb and Trithorax in Brain Development and Diseases.

Authors:  Janise N Kuehner; Bing Yao
Journal:  Epigenomes       Date:  2019-08-21

4.  Sequence complementarity between human noncoding RNAs and SARS-CoV-2 genes: What are the implications for human health?

Authors:  Rossella Talotta; Shervin Bahrami; Magdalena Janina Laska
Journal:  Biochim Biophys Acta Mol Basis Dis       Date:  2021-10-15       Impact factor: 5.187

Review 5.  The roles of Polycomb repressive complexes in mammalian development and cancer.

Authors:  Andrea Piunti; Ali Shilatifard
Journal:  Nat Rev Mol Cell Biol       Date:  2021-03-15       Impact factor: 94.444

6.  Retrotransposon-derived promoter of Mammalian Aebp2.

Authors:  Hana Kim; Arundhati Bakshi; Joomyeong Kim
Journal:  PLoS One       Date:  2015-04-27       Impact factor: 3.240

  6 in total

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