Literature DB >> 23740293

Biomolecular ligands screening using radiation damping difference WaterLOGSY spectroscopy.

Peng Sun1, Xianwang Jiang, Bin Jiang, Xu Zhang, Maili Liu.   

Abstract

Water-ligand observed via gradient spectroscopy (WaterLOGSY) is a widely used nuclear magnetic resonance method for ligand screening. The crucial procedure for the effectiveness of WaterLOGSY is selective excitation of the water resonance. The selective excitation is conventionally achieved by using long selective pulse, which causes partial saturation of the water magnetization leading to reduction of sensitivity, in addition to time consuming and error prone. Therefore, many improvements have been made to enhance the sensitivity and robustness of the method. Here we propose an alternative selective excitation scheme for WaterLOGSY by utilizing radiation damping effect. The pulse scheme starts simply with a hard inversion pulse, instead of selective pulse or pulse train, followed by a pulse field gradient to control the radiation damping effect. The rest parts of the pulse scheme are similar to conventional WaterLOGSY. When the gradient pulse is applied immediately after the inversion pulse, the radiation damping effect is suppressed, and all of the magnetization is inversed. When the gradient pulse and the inversion pulse are about 10-20 ms apart, the radiation damping effect remains active and drives the water magnetization toward +z-axis, resulting in selective non-inversion of the water magnetization. By taking the differences of the spectra obtained under these two conditions, one should get the result of WaterLOGSY. The method is demonstrated to be simple, robust and sensitive for ligand screening.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23740293     DOI: 10.1007/s10858-013-9748-4

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  24 in total

Review 1.  Theory and applications of NMR-based screening in pharmaceutical research.

Authors:  Christopher A Lepre; Jonathan M Moore; Jeffrey W Peng
Journal:  Chem Rev       Date:  2004-08       Impact factor: 60.622

2.  Application of NMR screening techniques for observing ligand binding with a protein receptor.

Authors:  Sakurako Shimotakahara; Kazuo Furihata; Mitsuru Tashiro
Journal:  Magn Reson Chem       Date:  2005-01       Impact factor: 2.447

3.  The impact of pulse duration on composite WATERGATE pulse.

Authors:  Jingjing Wang; Xu Zhang; Peng Sun; Xianwang Jiang; Bin Jiang; Chunyang Cao; Maili Liu
Journal:  J Magn Reson       Date:  2010-07-16       Impact factor: 2.229

4.  An effective pulse sequence for detecting a ligand binding with a protein receptor using a WET sequence and the repeated Z-filters.

Authors:  Kazuo Furihata; Sakurako Shimotakahara; Yoichi Shibusawa; Mitsuru Tashiro
Journal:  Anal Sci       Date:  2010       Impact factor: 2.081

5.  ROESY with water flip back for high-field NMR of biomolecules.

Authors:  D B Fulton; F Ni
Journal:  J Magn Reson       Date:  1997-11       Impact factor: 2.229

6.  Use of a water flip-back pulse in the homonuclear NOESY experiment.

Authors:  G Lippens; C Dhalluin; J M Wieruszeski
Journal:  J Biomol NMR       Date:  1995-04       Impact factor: 2.835

7.  Clean STD-NMR spectrum for improved detection of ligand-protein interactions at low concentration of protein.

Authors:  Youlin Xia; Qi Zhu; Kyu-Yeon Jun; Jingchun Wang; Xiaolian Gao
Journal:  Magn Reson Chem       Date:  2010-12       Impact factor: 2.447

8.  Saturation transfer difference nuclear magnetic resonance study on the specific binding of ligand to protein.

Authors:  Zhusheng Ji; Zhongxiu Yao; Maili Liu
Journal:  Anal Biochem       Date:  2008-11-27       Impact factor: 3.365

9.  Time efficient detection of protein-ligand interactions with the polarization optimized PO-WaterLOGSY NMR experiment.

Authors:  Alvar D Gossert; Christelle Henry; Marcel J J Blommers; Wolfgang Jahnke; César Fernández
Journal:  J Biomol NMR       Date:  2009-02-11       Impact factor: 2.835

10.  Analysis of competitive binding of ligands to human serum albumin using NMR relaxation measurements.

Authors:  Y F Cui; G Y Bai; C G Li; C H Ye; M L Liu
Journal:  J Pharm Biomed Anal       Date:  2004-02-04       Impact factor: 3.935

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.