Literature DB >> 23737523

The chlorite dismutase (HemQ) from Staphylococcus aureus has a redox-sensitive heme and is associated with the small colony variant phenotype.

Jeffrey A Mayfield1, Neal D Hammer, Richard C Kurker, Thomas K Chen, Sunil Ojha, Eric P Skaar, Jennifer L DuBois.   

Abstract

The chlorite dismutases (C-family proteins) are a widespread family of heme-binding proteins for which chemical and biological roles remain unclear. An association of the gene with heme biosynthesis in Gram-positive bacteria was previously demonstrated by experiments involving introduction of genes from two Gram-positive species into heme biosynthesis mutant strains of Escherichia coli, leading to the gene being renamed hemQ. To assess the gene product's biological role more directly, a Staphylococcus aureus strain with an inactivated hemQ gene was generated and shown to be a slow growing small colony variant under aerobic but not anaerobic conditions. The small colony variant phenotype is rescued by the addition of exogenous heme despite an otherwise wild type heme biosynthetic pathway. The ΔhemQ mutant accumulates coproporphyrin specifically under aerobic conditions. Although its sequence is highly similar to functional chlorite dismutases, the HemQ protein has no steady state reactivity with chlorite, very modest reactivity with H2O2 or peracetic acid, and no observable transient intermediates. HemQ's equilibrium affinity for heme is in the low micromolar range. Holo-HemQ reconstituted with heme exhibits heme lysis after <50 turnovers with peroxide and <10 turnovers with chlorite. The heme-free apoprotein aggregates or unfolds over time. IsdG-like proteins and antibiotic biosynthesis monooxygenases are close sequence and structural relatives of HemQ that use heme or porphyrin-like organic molecules as substrates. The genetic and biochemical data suggest a similar substrate role for heme or porphyrin, with possible sensor-regulator functions for the protein. HemQ heme could serve as the means by which S. aureus reversibly adopts an SCV phenotype in response to redox stress.

Entities:  

Keywords:  Bacteria; Chlorite Dismutase; Heme; Peroxidase; Redox Regulation; Staphylococcus aureus; Superoxide Ion

Mesh:

Substances:

Year:  2013        PMID: 23737523      PMCID: PMC5395028          DOI: 10.1074/jbc.M112.442335

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  75 in total

1.  Discovery and Characterization of HemQ: an essential heme biosynthetic pathway component.

Authors:  Tamara A Dailey; Tye O Boynton; Angela-Nadia Albetel; Svetlana Gerdes; Michael K Johnson; Harry A Dailey
Journal:  J Biol Chem       Date:  2010-06-11       Impact factor: 5.157

2.  Modulating heme redox potential through protein-induced porphyrin distortion.

Authors:  Charles Olea; John Kuriyan; Michael A Marletta
Journal:  J Am Chem Soc       Date:  2010-09-22       Impact factor: 15.419

3.  Peroxidase-type reactions suggest a heterolytic/nucleophilic O-O joining mechanism in the heme-dependent chlorite dismutase.

Authors:  Jeffrey A Mayfield; Béatrice Blanc; Kenton R Rodgers; Gudrun S Lukat-Rodgers; Jennifer L DuBois
Journal:  Biochemistry       Date:  2013-09-23       Impact factor: 3.162

4.  Solution structure and characterization of the heme chaperone CcmE.

Authors:  Fabio Arnesano; Lucia Banci; Paul D Barker; Ivano Bertini; Antonio Rosato; Xun Cheng Su; Maria Silvia Viezzoli
Journal:  Biochemistry       Date:  2002-11-19       Impact factor: 3.162

5.  Oxygen-dependent coproporphyrinogen III oxidase (HemF) from Escherichia coli is stimulated by manganese.

Authors:  Daniela Breckau; Esther Mahlitz; Anselm Sauerwald; Gunhild Layer; Dieter Jahn
Journal:  J Biol Chem       Date:  2003-09-15       Impact factor: 5.157

6.  Using sequence similarity networks for visualization of relationships across diverse protein superfamilies.

Authors:  Holly J Atkinson; John H Morris; Thomas E Ferrin; Patricia C Babbitt
Journal:  PLoS One       Date:  2009-02-03       Impact factor: 3.240

7.  Effect of Asp-235-->Asn substitution on the absorption spectrum and hydrogen peroxide reactivity of cytochrome c peroxidase.

Authors:  L B Vitello; J E Erman; M A Miller; J M Mauro; J Kraut
Journal:  Biochemistry       Date:  1992-11-24       Impact factor: 3.162

8.  Verdoheme formation in Proteus mirabilis catalase.

Authors:  Pierre Andreoletti; Jean-Marie Mouesca; Patrice Gouet; Michel Jaquinod; Chantal Capeillère-Blandin; Hélène Marie Jouve
Journal:  Biochim Biophys Acta       Date:  2009-04-24

9.  In vivo and in vitro studies of Bacillus subtilis ferrochelatase mutants suggest substrate channeling in the heme biosynthesis pathway.

Authors:  Ulf Olsson; Annika Billberg; Sara Sjövall; Salam Al-Karadaghi; Mats Hansson
Journal:  J Bacteriol       Date:  2002-07       Impact factor: 3.490

10.  The IsdC protein from Staphylococcus aureus uses a flexible binding pocket to capture heme.

Authors:  Valerie A Villareal; Rosemarie M Pilpa; Scott A Robson; Evgeny A Fadeev; Robert T Clubb
Journal:  J Biol Chem       Date:  2008-08-20       Impact factor: 5.157

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  32 in total

Review 1.  Making and breaking heme.

Authors:  Arianna I Celis; Jennifer L DuBois
Journal:  Curr Opin Struct Biol       Date:  2019-02-22       Impact factor: 6.809

2.  Reactions of Ferrous Coproheme Decarboxylase (HemQ) with O2 and H2O2 Yield Ferric Heme b.

Authors:  Bennett R Streit; Arianna I Celis; Krista Shisler; Kenton R Rodgers; Gudrun S Lukat-Rodgers; Jennifer L DuBois
Journal:  Biochemistry       Date:  2016-12-16       Impact factor: 3.162

Review 3.  Heme Synthesis and Acquisition in Bacterial Pathogens.

Authors:  Jacob E Choby; Eric P Skaar
Journal:  J Mol Biol       Date:  2016-03-24       Impact factor: 5.469

Review 4.  Production of dioxygen in the dark: dismutases of oxyanions.

Authors:  Jennifer L DuBois; Sunil Ojha
Journal:  Met Ions Life Sci       Date:  2015

5.  Structure-Based Mechanism for Oxidative Decarboxylation Reactions Mediated by Amino Acids and Heme Propionates in Coproheme Decarboxylase (HemQ).

Authors:  Arianna I Celis; George H Gauss; Bennett R Streit; Krista Shisler; Garrett C Moraski; Kenton R Rodgers; Gudrun S Lukat-Rodgers; John W Peters; Jennifer L DuBois
Journal:  J Am Chem Soc       Date:  2017-01-27       Impact factor: 15.419

Review 6.  HemQ: An iron-coproporphyrin oxidative decarboxylase for protoheme synthesis in Firmicutes and Actinobacteria.

Authors:  Harry A Dailey; Svetlana Gerdes
Journal:  Arch Biochem Biophys       Date:  2015-02-21       Impact factor: 4.013

7.  Unusual Peroxide-Dependent, Heme-Transforming Reaction Catalyzed by HemQ.

Authors:  Arianna I Celis; Bennett R Streit; Garrett C Moraski; Ravi Kant; Timothy D Lash; Gudrun S Lukat-Rodgers; Kenton R Rodgers; Jennifer L DuBois
Journal:  Biochemistry       Date:  2015-06-23       Impact factor: 3.162

8.  Control of Metabolite Flux during the Final Steps of Heme b Biosynthesis in Gram-Positive Bacteria.

Authors:  Arianna I Celis; Jacob E Choby; James Kentro; Eric P Skaar; Jennifer L DuBois
Journal:  Biochemistry       Date:  2019-06-26       Impact factor: 3.162

Review 9.  Substrate, product, and cofactor: The extraordinarily flexible relationship between the CDE superfamily and heme.

Authors:  Arianna I Celis; Jennifer L DuBois
Journal:  Arch Biochem Biophys       Date:  2015-03-14       Impact factor: 4.013

10.  Noncanonical coproporphyrin-dependent bacterial heme biosynthesis pathway that does not use protoporphyrin.

Authors:  Harry A Dailey; Svetlana Gerdes; Tamara A Dailey; Joseph S Burch; John D Phillips
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-02       Impact factor: 11.205

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