Literature DB >> 23732541

Arabidopsis ARGONAUTE7 selects miR390 through multiple checkpoints during RISC assembly.

Yayoi Endo1, Hiro-oki Iwakawa, Yukihide Tomari.   

Abstract

Plant ARGONAUTE7 (AGO7) assembles RNA-induced silencing complex (RISC) specifically with miR390 and regulates the auxin-signalling pathway via production of TAS3 trans-acting siRNAs (tasiRNAs). However, how AGO7 discerns miR390 among other miRNAs remains unclear. Here, we show that the 5' adenosine of miR390 and the central region of miR390/miR390* duplex are critical for the specific interaction with AGO7. Furthermore, despite the existence of mismatches in the seed and central regions of the duplex, cleavage of the miR390* strand is required for maturation of AGO7-RISC. These findings suggest that AGO7 uses multiple checkpoints to select miR390, thereby circumventing promiscuous tasiRNA production.

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Year:  2013        PMID: 23732541      PMCID: PMC3701240          DOI: 10.1038/embor.2013.73

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  31 in total

1.  Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation.

Authors:  Taiowa A Montgomery; Miya D Howell; Josh T Cuperus; Dawei Li; Jesse E Hansen; Amanda L Alexander; Elisabeth J Chapman; Noah Fahlgren; Edwards Allen; James C Carrington
Journal:  Cell       Date:  2008-03-13       Impact factor: 41.582

Review 2.  Origin, biogenesis, and activity of plant microRNAs.

Authors:  Olivier Voinnet
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

Review 3.  Biogenesis of small RNAs in animals.

Authors:  V Narry Kim; Jinju Han; Mikiko C Siomi
Journal:  Nat Rev Mol Cell Biol       Date:  2009-02       Impact factor: 94.444

Review 4.  Origins and Mechanisms of miRNAs and siRNAs.

Authors:  Richard W Carthew; Erik J Sontheimer
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

5.  The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins.

Authors:  Atsushi Takeda; Shintaro Iwasaki; Toshiaki Watanabe; Maki Utsumi; Yuichiro Watanabe
Journal:  Plant Cell Physiol       Date:  2008-03-14       Impact factor: 4.927

6.  Structural determinants of miRNAs for RISC loading and slicer-independent unwinding.

Authors:  Tomoko Kawamata; Hervé Seitz; Yukihide Tomari
Journal:  Nat Struct Mol Biol       Date:  2009-08-16       Impact factor: 15.369

7.  Hierarchical rules for Argonaute loading in Drosophila.

Authors:  Benjamin Czech; Rui Zhou; Yaniv Erlich; Julius Brennecke; Richard Binari; Christians Villalta; Assaf Gordon; Norbert Perrimon; Gregory J Hannon
Journal:  Mol Cell       Date:  2009-11-13       Impact factor: 17.970

8.  Sorting of Drosophila small silencing RNAs partitions microRNA* strands into the RNA interference pathway.

Authors:  Megha Ghildiyal; Jia Xu; Hervé Seitz; Zhiping Weng; Phillip D Zamore
Journal:  RNA       Date:  2009-11-16       Impact factor: 4.942

9.  Distinct mechanisms for microRNA strand selection by Drosophila Argonautes.

Authors:  Katsutomo Okamura; Na Liu; Eric C Lai
Journal:  Mol Cell       Date:  2009-11-13       Impact factor: 17.970

Review 10.  Small silencing RNAs: an expanding universe.

Authors:  Megha Ghildiyal; Phillip D Zamore
Journal:  Nat Rev Genet       Date:  2009-02       Impact factor: 53.242

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  30 in total

Review 1.  RNAi in Plants: An Argonaute-Centered View.

Authors:  Xiaofeng Fang; Yijun Qi
Journal:  Plant Cell       Date:  2016-02-11       Impact factor: 11.277

2.  The Slicer Activity of ARGONAUTE1 Is Required Specifically for the Phasing, Not Production, of Trans-Acting Short Interfering RNAs in Arabidopsis.

Authors:  Laura Arribas-Hernández; Antonin Marchais; Christian Poulsen; Bettina Haase; Judith Hauptmann; Vladimir Benes; Gunter Meister; Peter Brodersen
Journal:  Plant Cell       Date:  2016-06-27       Impact factor: 11.277

3.  Expression profiles of miRNAs in Gossypium raimondii.

Authors:  Jun Ma; Teng-long Guo; Qing-lian Wang; Kun-bo Wang; Run-run Sun; Bao-hong Zhang
Journal:  J Zhejiang Univ Sci B       Date:  2015-04       Impact factor: 3.066

Review 4.  Messages on small RNA duplexes in plants.

Authors:  Taichiro Iki
Journal:  J Plant Res       Date:  2016-11-23       Impact factor: 2.629

Review 5.  miRNomes involved in imparting thermotolerance to crop plants.

Authors:  Vijay Gahlaut; Vinay Kumar Baranwal; Paramjit Khurana
Journal:  3 Biotech       Date:  2018-11-24       Impact factor: 2.406

6.  The Emergence, Evolution, and Diversification of the miR390-TAS3-ARF Pathway in Land Plants.

Authors:  Rui Xia; Jing Xu; Blake C Meyers
Journal:  Plant Cell       Date:  2017-04-24       Impact factor: 11.277

Review 7.  PhasiRNAs in Plants: Their Biogenesis, Genic Sources, and Roles in Stress Responses, Development, and Reproduction.

Authors:  Yuanlong Liu; Chong Teng; Rui Xia; Blake C Meyers
Journal:  Plant Cell       Date:  2020-08-18       Impact factor: 11.277

8.  Regulation of Female Germline Specification via Small RNA Mobility in Arabidopsis.

Authors:  Zhenxia Su; Nannan Wang; Zhimin Hou; Baiyang Li; Dingning Li; Yanhui Liu; Hanyang Cai; Yuan Qin; Xuemei Chen
Journal:  Plant Cell       Date:  2020-07-23       Impact factor: 11.277

9.  Identification of AGO3-associated miRNAs and computational prediction of their targets in the green alga Chlamydomonas reinhardtii.

Authors:  Adam Voshall; Eun-Jeong Kim; Xinrong Ma; Etsuko N Moriyama; Heriberto Cerutti
Journal:  Genetics       Date:  2015-03-13       Impact factor: 4.562

Review 10.  The expanding world of small RNAs in plants.

Authors:  Filipe Borges; Robert A Martienssen
Journal:  Nat Rev Mol Cell Biol       Date:  2015-11-04       Impact factor: 94.444

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