Literature DB >> 23732219

Molecular and evolutionary aspects of microbial sensory rhodopsins.

Keiichi Inoue1, Takashi Tsukamoto2, Yuki Sudo3.   

Abstract

Retinal proteins (~rhodopsins) are photochemically reactive membrane-embedded proteins, with seven transmembrane α-helices which bind the chromophore retinal (vitamin A aldehyde). They are widely distributed through all three biological kingdoms, eukarya, bacteria and archaea, indicating the biological significance of the retinal proteins. Light absorption by the retinal proteins triggers a photoisomerization of the chromophore, leading to the biological function, light-energy conversion or light-signal transduction. This article reviews molecular and evolutionary aspects of the light-signal transduction by microbial sensory receptors and their related proteins. This article is part of a Special Issue entitled: Retinal Proteins - You can teach an old dog new tricks.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Membrane protein; Phototaxis; Retinal; Signal transfer

Mesh:

Substances:

Year:  2013        PMID: 23732219     DOI: 10.1016/j.bbabio.2013.05.005

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  27 in total

1.  Retinal Configuration of ppR Intermediates Revealed by Photoirradiation Solid-State NMR and DFT.

Authors:  Yoshiteru Makino; Izuru Kawamura; Takashi Okitsu; Akimori Wada; Naoki Kamo; Yuki Sudo; Kazuyoshi Ueda; Akira Naito
Journal:  Biophys J       Date:  2018-07-03       Impact factor: 4.033

2.  X-ray Crystallographic Structure of Thermophilic Rhodopsin: IMPLICATIONS FOR HIGH THERMAL STABILITY AND OPTOGENETIC FUNCTION.

Authors:  Takashi Tsukamoto; Kenji Mizutani; Taisuke Hasegawa; Megumi Takahashi; Naoya Honda; Naoki Hashimoto; Kazumi Shimono; Keitaro Yamashita; Masaki Yamamoto; Seiji Miyauchi; Shin Takagi; Shigehiko Hayashi; Takeshi Murata; Yuki Sudo
Journal:  J Biol Chem       Date:  2016-04-18       Impact factor: 5.157

Review 3.  Conversion of microbial rhodopsins: insights into functionally essential elements and rational protein engineering.

Authors:  Akimasa Kaneko; Keiichi Inoue; Keiichi Kojima; Hideki Kandori; Yuki Sudo
Journal:  Biophys Rev       Date:  2017-11-25

4.  Light-Activated Reversible Imine Isomerization: Towards a Photochromic Protein Switch.

Authors:  Tetyana Berbasova; Elizabeth M Santos; Meisam Nosrati; Chrysoula Vasileiou; James H Geiger; Babak Borhan
Journal:  Chembiochem       Date:  2016-02-10       Impact factor: 3.164

Review 5.  Optophysiology: Illuminating cell physiology with optogenetics.

Authors:  Peng Tan; Lian He; Yun Huang; Yubin Zhou
Journal:  Physiol Rev       Date:  2022-01-24       Impact factor: 37.312

Review 6.  Rhodopsins: An Excitingly Versatile Protein Species for Research, Development and Creative Engineering.

Authors:  Willem J de Grip; Srividya Ganapathy
Journal:  Front Chem       Date:  2022-06-22       Impact factor: 5.545

7.  Spectroscopic Characterization of Halorhodopsin Reconstituted into Nanodisks Using Native Lipids.

Authors:  Ayumi Yamamoto; Takashi Tsukamoto; Kenshiro Suzuki; Eri Hashimoto; Yoshihiro Kobashigawa; Kousuke Shibasaki; Takeshi Uchida; Fuyuhiko Inagaki; Makoto Demura; Koichiro Ishimori
Journal:  Biophys J       Date:  2020-04-29       Impact factor: 4.033

8.  Isolation and Characterization of Strain Exiguobacterium sp. KRL4, a Producer of Bioactive Secondary Metabolites from a Tibetan Glacier.

Authors:  Pietro Tedesco; Fortunato Palma Esposito; Antonio Masino; Giovanni Andrea Vitale; Emiliana Tortorella; Annarita Poli; Barbara Nicolaus; Leonardo Joaquim van Zyl; Marla Trindade; Donatella de Pascale
Journal:  Microorganisms       Date:  2021-04-21

9.  Light dependent synthesis of a nucleotide second messenger controls the motility of a spirochete bacterium.

Authors:  Jun Xu; Nobuo Koizumi; Yusuke V Morimoto; Ryo Ozuru; Toshiyuki Masuzawa; Shuichi Nakamura
Journal:  Sci Rep       Date:  2022-04-26       Impact factor: 4.996

Review 10.  The Journey from Two-Step to Multi-Step Phosphorelay Signaling Systems.

Authors:  Deepti Singh; Priyanka Gupta; Sneh Lata Singla-Pareek; Kadambot H M Siddique; Ashwani Pareek
Journal:  Curr Genomics       Date:  2021-01       Impact factor: 2.236

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