Literature DB >> 23723782

Pyridinium bis-(pyridine-κN)tetra-kis-(thio-cyanato-κN)ferrate(III)-pyrazine-2-carbo-nitrile-pyridine (1/4/1).

Sergii I Shylin1, Il'ya A Gural'skiy, Matti Haukka, Irina A Golenya.   

Abstract

In the title compound, (C5H6N)[Fe(NCS)4(C5H5N)2]·4C5H3N3·C5H5N, the Fe(III) ion is located on an inversion centre and is six-coordinated by four N atoms of the thio-cyanate ligands and two pyridine N atoms in a trans arrangement, forming a slightly distorted octa-hedral geometry. A half-occupied H atom attached to a pyridinium cation forms an N-H⋯N hydrogen bond with a centrosymmetrically-related pyridine unit. Four pyrazine-2-carbo-nitrile mol-ecules crystallize per complex anion. In the crystal, π-π stacking inter-actions are present [centroid-centroid distances = 3.6220 (9), 3.6930 (9), 3.5532 (9), 3.5803 (9) and 3.5458 (8) Å].

Entities:  

Year:  2013        PMID: 23723782      PMCID: PMC3647816          DOI: 10.1107/S1600536813010362

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of mol­ecular assemblies comprising cationic and anionic modules, see: Fritsky et al. (1998 ▶, 2004 ▶); Kanderal et al. (2005 ▶). For FeII–thio­cyanate complexes with aromatic N-donor ligands indicating spin crossover, see: Gamez et al. (2009 ▶); Niel et al. (2001 ▶). For related structures, see: Moroz et al. (2010 ▶); Penkova et al. (2010 ▶); Petrusenko et al. (1997 ▶); Real et al. (1991 ▶).

Experimental

Crystal data

(C5H6N)[Fe(NCS)4(C5H5N)2]·4C5H3N3·C5H5N M = 1025.99 Triclinic, a = 8.1766 (2) Å b = 11.9362 (3) Å c = 12.7519 (3) Å α = 102.982 (1)° β = 97.799 (1)° γ = 97.684 (1)° V = 1184.02 (5) Å3 Z = 1 Mo Kα radiation μ = 0.55 mm−1 T = 120 K 0.38 × 0.19 × 0.17 mm

Data collection

Bruker Kappa APEXII DUO CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.818, T max = 0.910 18588 measured reflections 5482 independent reflections 4470 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.076 S = 1.01 5482 reflections 313 parameters H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.37 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 1997 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813010362/hy2622sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813010362/hy2622Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813010362/hy2622Isup3.cdx Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C5H6N)[Fe(NCS)4(C5H5N)2]·4C5H3N3·C5H5NZ = 1
Mr = 1025.99F(000) = 527
Triclinic, P1Dx = 1.439 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.1766 (2) ÅCell parameters from 7810 reflections
b = 11.9362 (3) Åθ = 2.6–27.6°
c = 12.7519 (3) ŵ = 0.55 mm1
α = 102.982 (1)°T = 120 K
β = 97.799 (1)°Block, red
γ = 97.684 (1)°0.38 × 0.19 × 0.17 mm
V = 1184.02 (5) Å3
Bruker Kappa APEXII DUO CCD diffractometer5482 independent reflections
Radiation source: fine-focus sealed tube4470 reflections with I > 2σ(I)
Curved graphite crystal monochromatorRint = 0.024
Detector resolution: 16 pixels mm-1θmax = 27.7°, θmin = 1.7°
φ and ω scans with κ offseth = −10→10
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)k = −15→15
Tmin = 0.818, Tmax = 0.910l = −16→16
18588 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.076H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0363P)2 + 0.3715P] where P = (Fo2 + 2Fc2)/3
5482 reflections(Δ/σ)max = 0.001
313 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.37 e Å3
Experimental. Hydrogen atoms were positioned geometrically and constrained to ride on their parent atoms, with C—H = 0.95 Å, N—H = 0.88 Å, and Uiso = 1.2 Ueq(parent atom). The highest peak is located 0.70 Å from atom C18 and the deepest hole is located 0.48 Å from atom Fe1.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Fe10.50000.50000.50000.01474 (8)
S10.18557 (5)0.25687 (4)0.16391 (3)0.02717 (11)
S20.31797 (5)0.74869 (4)0.27623 (4)0.02695 (11)
N10.72282 (15)0.50545 (11)0.43036 (10)0.0163 (3)
N20.38008 (16)0.37328 (11)0.36553 (11)0.0200 (3)
N30.42809 (15)0.62208 (11)0.42297 (11)0.0193 (3)
N40.86353 (18)0.50989 (12)0.04639 (11)0.0279 (3)
H4N0.95280.50420.01530.033*0.50
N50.40216 (18)0.10177 (12)0.42369 (12)0.0278 (3)
N60.09833 (17)−0.12537 (12)0.62053 (11)0.0271 (3)
N70.90967 (18)0.11755 (13)−0.07429 (12)0.0302 (3)
N80.59044 (17)−0.09046 (12)0.13024 (11)0.0237 (3)
N90.67103 (17)0.14539 (11)0.12764 (11)0.0220 (3)
N100.15882 (17)0.11284 (12)0.62270 (11)0.0224 (3)
C10.29957 (18)0.32456 (13)0.28113 (12)0.0173 (3)
C20.80428 (18)0.60594 (13)0.41827 (12)0.0193 (3)
H20.76560.67660.44590.023*
C30.94253 (19)0.60979 (14)0.36697 (13)0.0213 (3)
H30.99810.68210.35970.026*
C40.99889 (19)0.50744 (14)0.32645 (13)0.0214 (3)
H41.09250.50800.28970.026*
C50.9167 (2)0.40386 (14)0.34019 (13)0.0225 (3)
H50.95410.33230.31420.027*
C60.77991 (19)0.40658 (13)0.39215 (12)0.0197 (3)
H60.72350.33540.40140.024*
C70.6803 (2)0.62600 (15)0.12971 (14)0.0297 (4)
H70.65080.70070.15390.036*
C80.5837 (2)0.52690 (15)0.14229 (13)0.0271 (4)
H80.48690.53280.17540.032*
C90.38283 (18)0.67553 (13)0.36185 (12)0.0176 (3)
C100.8197 (2)0.61399 (15)0.08152 (14)0.0283 (4)
H100.88670.68170.07300.034*
C110.32510 (19)0.07281 (13)0.48410 (13)0.0204 (3)
C120.22339 (18)0.03216 (13)0.55739 (12)0.0183 (3)
C130.1944 (2)−0.08487 (14)0.55571 (13)0.0238 (3)
H130.2437−0.13780.50740.029*
C140.0340 (2)−0.04577 (15)0.68615 (13)0.0255 (4)
H14−0.0350−0.07040.73380.031*
C150.0642 (2)0.07162 (15)0.68746 (13)0.0252 (4)
H150.01570.12460.73630.030*
C160.7703 (2)0.41443 (15)0.05894 (15)0.0309 (4)
H160.80240.34070.03440.037*
C170.6293 (2)0.42005 (15)0.10637 (14)0.0292 (4)
H170.56450.35110.11420.035*
C180.72593 (18)0.05927 (13)0.06193 (12)0.0182 (3)
C190.53568 (19)−0.00576 (14)0.19602 (12)0.0209 (3)
H190.4667−0.02560.24560.025*
C200.5757 (2)0.11054 (14)0.19485 (12)0.0221 (3)
H200.53340.16750.24390.026*
C210.68690 (19)−0.05677 (14)0.06260 (12)0.0211 (3)
H210.7296−0.11380.01390.025*
C220.82945 (19)0.09294 (14)−0.01369 (13)0.0219 (3)
U11U22U33U12U13U23
Fe10.01377 (15)0.01447 (15)0.01549 (15)0.00130 (11)0.00307 (11)0.00305 (12)
S10.0231 (2)0.0345 (2)0.0178 (2)0.00335 (17)0.00294 (16)−0.00485 (17)
S20.0290 (2)0.0289 (2)0.0305 (2)0.00821 (18)0.00977 (18)0.01836 (18)
N10.0150 (6)0.0167 (6)0.0168 (6)0.0016 (5)0.0026 (5)0.0042 (5)
N20.0187 (6)0.0182 (7)0.0213 (7)0.0017 (5)0.0032 (5)0.0018 (5)
N30.0177 (6)0.0178 (7)0.0224 (7)0.0020 (5)0.0045 (5)0.0050 (5)
N40.0315 (8)0.0282 (8)0.0275 (8)0.0064 (6)0.0127 (6)0.0086 (6)
N50.0284 (8)0.0291 (8)0.0268 (7)0.0039 (6)0.0103 (6)0.0062 (6)
N60.0268 (8)0.0264 (8)0.0279 (8)−0.0001 (6)0.0022 (6)0.0108 (6)
N70.0279 (8)0.0364 (9)0.0255 (7)−0.0008 (6)0.0082 (6)0.0076 (6)
N80.0275 (7)0.0216 (7)0.0223 (7)0.0020 (6)0.0076 (6)0.0054 (6)
N90.0244 (7)0.0212 (7)0.0212 (7)0.0048 (5)0.0052 (6)0.0054 (6)
N100.0244 (7)0.0238 (7)0.0204 (7)0.0061 (6)0.0061 (5)0.0059 (6)
C10.0160 (7)0.0161 (7)0.0215 (8)0.0043 (6)0.0085 (6)0.0041 (6)
C20.0181 (8)0.0165 (7)0.0228 (8)0.0018 (6)0.0025 (6)0.0048 (6)
C30.0174 (8)0.0209 (8)0.0259 (8)−0.0004 (6)0.0037 (6)0.0083 (7)
C40.0145 (7)0.0285 (9)0.0223 (8)0.0026 (6)0.0059 (6)0.0076 (7)
C50.0210 (8)0.0217 (8)0.0257 (8)0.0070 (6)0.0064 (7)0.0045 (7)
C60.0206 (8)0.0166 (8)0.0219 (8)0.0018 (6)0.0045 (6)0.0054 (6)
C70.0383 (10)0.0239 (9)0.0268 (9)0.0102 (8)0.0048 (8)0.0038 (7)
C80.0264 (9)0.0330 (10)0.0236 (8)0.0089 (7)0.0064 (7)0.0073 (7)
C90.0144 (7)0.0164 (7)0.0219 (8)0.0011 (6)0.0081 (6)0.0023 (6)
C100.0363 (10)0.0226 (9)0.0265 (9)0.0023 (7)0.0065 (7)0.0081 (7)
C110.0201 (8)0.0194 (8)0.0204 (8)0.0036 (6)0.0017 (6)0.0029 (6)
C120.0158 (7)0.0227 (8)0.0158 (7)0.0024 (6)0.0007 (6)0.0054 (6)
C130.0231 (8)0.0232 (8)0.0238 (8)0.0032 (7)0.0029 (7)0.0042 (7)
C140.0191 (8)0.0380 (10)0.0202 (8)0.0004 (7)0.0017 (6)0.0124 (7)
C150.0238 (8)0.0337 (10)0.0202 (8)0.0080 (7)0.0072 (7)0.0073 (7)
C160.0364 (10)0.0219 (9)0.0371 (10)0.0087 (7)0.0108 (8)0.0081 (8)
C170.0307 (9)0.0255 (9)0.0337 (10)0.0032 (7)0.0079 (8)0.0119 (8)
C180.0153 (7)0.0238 (8)0.0149 (7)0.0019 (6)0.0016 (6)0.0049 (6)
C190.0179 (8)0.0277 (9)0.0168 (7)0.0021 (6)0.0038 (6)0.0055 (6)
C200.0228 (8)0.0263 (9)0.0178 (8)0.0085 (7)0.0056 (6)0.0028 (6)
C210.0231 (8)0.0211 (8)0.0187 (8)0.0045 (6)0.0056 (6)0.0021 (6)
C220.0207 (8)0.0235 (8)0.0197 (8)0.0014 (6)0.0025 (6)0.0039 (6)
Fe1—N32.0370 (13)C6—H60.9500
Fe1—N22.0424 (13)C7—C101.375 (2)
Fe1—N12.1320 (12)C7—C81.385 (2)
S1—C11.6229 (16)C7—H70.9500
S2—C91.6220 (16)C8—C171.374 (2)
N1—C61.3412 (19)C8—H80.9500
N1—C21.3430 (19)C10—H100.9500
N2—C11.164 (2)C11—C121.452 (2)
N3—C91.166 (2)C12—N101.340 (2)
N4—C101.336 (2)C12—C131.380 (2)
N4—C161.337 (2)C13—H130.9500
N4—H4N0.8800C14—C151.386 (2)
N5—C111.142 (2)C14—H140.9500
N6—C141.332 (2)C15—N101.333 (2)
N6—C131.337 (2)C15—H150.9500
N7—C221.141 (2)C16—C171.375 (2)
N8—C191.330 (2)C16—H160.9500
N8—C211.3355 (19)C17—H170.9500
C2—C31.381 (2)C18—N91.3411 (19)
C2—H20.9500C19—C201.387 (2)
C3—C41.380 (2)C19—H190.9500
C3—H30.9500C20—N91.331 (2)
C4—C51.385 (2)C20—H200.9500
C4—H40.9500C21—C181.381 (2)
C5—C61.376 (2)C21—H210.9500
C5—H50.9500C22—C181.453 (2)
N3i—Fe1—N3179.999 (1)N1—C6—H6118.6
N3i—Fe1—N2i88.77 (5)C5—C6—H6118.6
N3—Fe1—N2i91.23 (5)C10—C7—C8118.63 (16)
N3i—Fe1—N291.23 (5)C10—C7—H7120.7
N3—Fe1—N288.77 (5)C8—C7—H7120.7
N2i—Fe1—N2180.0C17—C8—C7119.32 (16)
N3i—Fe1—N190.30 (5)C17—C8—H8120.3
N3—Fe1—N189.70 (5)C7—C8—H8120.3
N2i—Fe1—N190.58 (5)N3—C9—S2179.33 (15)
N2—Fe1—N189.42 (5)N4—C10—C7121.91 (16)
N3i—Fe1—N1i89.70 (5)N4—C10—H10119.0
N3—Fe1—N1i90.30 (5)C7—C10—H10119.0
N2i—Fe1—N1i89.42 (5)N5—C11—C12177.71 (17)
N2—Fe1—N1i90.58 (5)N10—C12—C13123.29 (14)
N1—Fe1—N1i180.0N10—C12—C11116.65 (14)
C6—N1—C2118.34 (13)C13—C12—C11120.04 (14)
C6—N1—Fe1120.20 (10)N6—C13—C12121.47 (15)
C2—N1—Fe1121.37 (10)N6—C13—H13119.3
C1—N2—Fe1163.20 (12)C12—C13—H13119.3
C9—N3—Fe1167.56 (12)N6—C14—C15122.38 (15)
C10—N4—C16119.32 (15)N6—C14—H14118.8
C10—N4—H4N120.3C15—C14—H14118.8
C16—N4—H4N120.3N10—C15—C14122.39 (15)
C14—N6—C13115.74 (14)N10—C15—H15118.8
C19—N8—C21115.86 (14)C14—C15—H15118.8
N2—C1—S1179.41 (14)C15—N10—C12114.73 (14)
N7—C22—C18178.82 (18)N4—C16—C17121.84 (16)
N8—C21—C18121.37 (14)N4—C16—H16119.1
N8—C21—H21119.3C17—C16—H16119.1
C18—C21—H21119.3C8—C17—C16118.98 (16)
N1—C2—C3122.04 (14)C8—C17—H17120.5
N1—C2—H2119.0C16—C17—H17120.5
C3—C2—H2119.0N9—C18—C21123.30 (14)
C4—C3—C2119.23 (14)N9—C18—C22116.67 (14)
C4—C3—H3120.4C21—C18—C22120.03 (14)
C2—C3—H3120.4N8—C19—C20122.36 (14)
C3—C4—C5118.89 (14)N8—C19—H19118.8
C3—C4—H4120.6C20—C19—H19118.8
C5—C4—H4120.6N9—C20—C19122.46 (14)
C6—C5—C4118.72 (15)N9—C20—H20118.8
C6—C5—H5120.6C19—C20—H20118.8
C4—C5—H5120.6C20—N9—C18114.64 (13)
N1—C6—C5122.77 (14)
D—H···AD—HH···AD···AD—H···A
N4—H4N···N4ii0.881.802.677 (3)179
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N4—H4N⋯N4i 0.881.802.677 (3)179

Symmetry code: (i) .

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