Literature DB >> 23722847

Crystallization and preliminary X-ray study of a thermostable alanine racemase from Thermoanaerobacter tengcongensis MB4.

Hui Dong1, Shujing Xu, Xiaoyun Lu, Guangzheng He, Ranran Zhao, Shuai Chen, Sheng Fu, Jiansong Ju.   

Abstract

Alanine racemase (Alr(MB4)), a dimeric PLP-dependent thermostable enzyme from the anaerobic eubacterium Thermoanaerobacter tengcongensis MB4, was expressed and purified with a His(6) tag in a form suitable for X-ray crystallographic analysis. Crystals were grown by the hanging-drop vapour-diffusion method at 289 K using a solution consisting of 0.1 M bis-tris pH 7.0, 22%(w/v) polyethylene glycol 4000. X-ray diffraction data were collected to 2.6 Å resolution. The crystal belonged to the orthorhombic space group P2(1)2(1)2(1), with two protein molecules in an asymmetric unit.

Entities:  

Keywords:  Thermoanaerobacter tengcongensis; alanine racemase

Mesh:

Substances:

Year:  2013        PMID: 23722847      PMCID: PMC3668588          DOI: 10.1107/S1744309113011743

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  14 in total

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Authors:  R B Silverman
Journal:  J Enzyme Inhib       Date:  1988

2.  Determination of the structure of alanine racemase from Bacillus stearothermophilus at 1.9-A resolution.

Authors:  J P Shaw; G A Petsko; D Ringe
Journal:  Biochemistry       Date:  1997-02-11       Impact factor: 3.162

3.  The 1.9 A crystal structure of alanine racemase from Mycobacterium tuberculosis contains a conserved entryway into the active site.

Authors:  Pierre LeMagueres; Hookang Im; Jerry Ebalunode; Ulrich Strych; Michael J Benedik; James M Briggs; Harold Kohn; Kurt L Krause
Journal:  Biochemistry       Date:  2005-02-08       Impact factor: 3.162

4.  Structures of an alanine racemase from Bacillus anthracis (BA0252) in the presence and absence of (R)-1-aminoethylphosphonic acid (L-Ala-P).

Authors:  Kinfai Au; Jingshan Ren; Thomas S Walter; Karl Harlos; Joanne E Nettleship; Raymond J Owens; David I Stuart; Robert M Esnouf
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-04-05

5.  Structural insights into the alanine racemase from Enterococcus faecalis.

Authors:  Amit Priyadarshi; Eun Hye Lee; Min Woo Sung; Ki Hyun Nam; Won Ho Lee; Eunice Eunkyeong Kim; Kwang Yeon Hwang
Journal:  Biochim Biophys Acta       Date:  2009-03-26

6.  Residues Asp164 and Glu165 at the substrate entryway function potently in substrate orientation of alanine racemase from E. coli: Enzymatic characterization with crystal structure analysis.

Authors:  Dalei Wu; Tiancen Hu; Liang Zhang; Jing Chen; Jiamu Du; Jianping Ding; Hualiang Jiang; Xu Shen
Journal:  Protein Sci       Date:  2008-04-23       Impact factor: 6.725

7.  Use of NMR metabolomics to analyze the targets of D-cycloserine in mycobacteria: role of D-alanine racemase.

Authors:  Steven Halouska; Ofelia Chacon; Robert J Fenton; Denise K Zinniel; Raul G Barletta; Robert Powers
Journal:  J Proteome Res       Date:  2007-11-03       Impact factor: 4.466

8.  The crystal structure of alanine racemase from Streptococcus pneumoniae, a target for structure-based drug design.

Authors:  Hookang Im; Miriam L Sharpe; Ulrich Strych; Milya Davlieva; Kurt L Krause
Journal:  BMC Microbiol       Date:  2011-05-25       Impact factor: 3.605

9.  Structural features and kinetic characterization of alanine racemase from Staphylococcus aureus (Mu50).

Authors:  Emma R Scaletti; Sylvia R Luckner; Kurt L Krause
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-12-09

10.  Biochemical and structural characterization of alanine racemase from Bacillus anthracis (Ames).

Authors:  Rafael M Couñago; Milya Davlieva; Ulrich Strych; Ryan E Hill; Kurt L Krause
Journal:  BMC Struct Biol       Date:  2009-08-20
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  1 in total

1.  Crystal Structure of a Thermostable Alanine Racemase from Thermoanaerobacter tengcongensis MB4 Reveals the Role of Gln360 in Substrate Selection.

Authors:  Xiaoliang Sun; Guangzheng He; Xiaoyan Wang; Shujing Xu; Jiansong Ju; Xiaoling Xu
Journal:  PLoS One       Date:  2015-07-28       Impact factor: 3.240

  1 in total

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