| Literature DB >> 23718141 |
Gangshi Wang, Jie Gao, Haili Huang, Yu Tian, Liyan Xue, Weihua Wang, Weidi You, Hongwei Lian, Xiaojian Duan, Benyan Wu, Mengwei Wang.
Abstract
BACKGROUND: Long interspersed nuclear element-1 (LINE-1 or L1), the most abundant and only autonomously active family of non-LTR retrotransposons in the human genome, expressed not only in the germ lines but also in somatic tissues. It contributes to genetic instability, aging, and age-related diseases, such as cancer. Our previous study identified in human gastric adenocarcinoma an upregulated transcript GCRG213, which shared 88% homology with human L1 sequence and contained a putative conserved apurinic/apyrimidinic endonucleas1 domain.Entities:
Mesh:
Substances:
Year: 2013 PMID: 23718141 PMCID: PMC3670995 DOI: 10.1186/1471-2407-13-265
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
Clinicopathological parameters of gastric cancer patients studied in tissue microarray
| Gender | | | | |
| Male | 144(82.28%) | 31 | 113 | 0.111 |
| Female | 31(17.72%) | 11 | 20 | |
| Age | | | | |
| <65 year | 104(59.43%) | 31 | 73 | 0.029 |
| ≥65 year | 71(40.57%) | 11 | 60 | |
| Smoking | | | | |
| Yes | 45(27.27%) | 7 | 38 | 0.278 |
| No | 120(72.73%) | 30 | 90 | |
| Drinking | | | | |
| Yes | 28(16.97%) | 2 | 26 | 0.060 |
| No | 137(83.03%) | 35 | 102 | |
| Family history of tumor | | | | |
| Yes | 14(8.43%) | 2 | 12 | 0.639 |
| No | 152(91.57%) | 36 | 116 | |
| Tumor location | | | | |
| Cardiac | 48(27.43%) | 8 | 40 | 0.360 |
| Body | 37(21.14%) | 10 | 27 | |
| Antrum | 90(51.43%) | 24 | 66 | |
| Tumor size (cm) | | | | |
| ≤1 | 11(6.29%) | 3 | 8 | 0.506 |
| 1-3 | 42(24.00%) | 13 | 29 | |
| >3 | 122(69.71%) | 26 | 96 | |
| Depth of invasion | | | | |
| T1 | 46(26.28%) | 12 | 34 | 0.635 |
| T2 | 21(12.00%) | 7 | 14 | |
| T3 | 33(18.86%) | 6 | 27 | |
| T4 | 75(42.86%) | 17 | 58 | |
| Lymph node involvement | | | | |
| Yes | 75(42.86%) | 16 | 59 | 0.592 |
| No | 100(57.14%) | 26 | 74 | |
| Grade of tumor differentiation | | | | |
| Well | 10(5.71%) | 0 | 10 | 0.001 |
| Moderate | 40(22.86%) | 4 | 36 | |
| Poor | 103(58.86%) | 27 | 76 | |
| Signet ring cell | 22(12.57%) | 11 | 11 | |
| Tumour stage (TNM) | | | | |
| 0 | 21(12.00%) | 3 | 18 | 0.217 |
| Ia | 14(8.00%) | 6 | 8 | |
| Ib | 41(23.43%) | 10 | 31 | |
| II | 60(34.29%) | 17 | 43 | |
| IIIa | 39(22.28%) | 6 | 33 | |
| Lauren’s classification | | | | |
| Intestinal type | 153(87.43%) | 31 | 122 | 0.015 |
| Diffuse type | 22(12.57%) | 11 | 11 | |
| Resection margin | | | | |
| Presence | 6(3.43%) | 0 | 6 | 0.361 |
| Absence | 169(96.57%) | 42 | 127 | |
| Microvascular invasion | | | | |
| Presence | 20(11.43%) | 5 | 15 | 0.911 |
| Absence | 155(88.57%) | 37 | 118 | |
| Status | | | | |
| alive | 121(71.18%) | 30 | 91 | 0.483 |
| dead | 49(28.82%) | 9 | 40 | |
| 5 year survival | | | | |
| <5 yr | 47(43.93%) | 12 | 48 | 0.871 |
| > = 5 yr | 60(50.07%) | 10 | 37 |
Figure 1GCRG213p expression in human malignant and non-malignant gastric mucosa. Both (A) primary gastric adenocarcinoma (100×) and (B) adenocarcinoma invaded into the lymph node (100×) showed positive GCRG213p stainging in the cytoplasm; (A’) and (B’) demonstrated the higher magnification (400×) from the area in (A) and (B). (C) In the non-malignant gastric epithelia, positive staining was observed in the basal membrane but not in the cytoplasm; GCRG213p immunoreactivity was detected in the cytoplasm of gastric intestinal metaplasia glands (arrowed) (100×); (C’) demonstrated the higher magnification (400×) from the area in (C).
GCRG213 expression in gastric tissue samples
| non-tumoral gastric epithelia | 112 | 112 | 0 | 0 | 0 | 0.00 |
| Intestinal metaplasia | 34 | 3 | 18 | 11 | 2 | 91.18 * |
| Low-/high-grade intraepithelial neoplasia | 28 | 1 | 17 | 10 | 0 | 96.43 * |
| adenocarcinoma without LNM † | 100 | 26 | 50 | 21 | 3 | 74.00 * |
| adenocarcinoma with LNM | 75 | 16 | 40 | 16 | 3 | 78.67 * |
| tumor metastatic to lymph node | 67 | 16 | 42 | 8 | 1 | 76.12 * |
†LNM Lymph node metastasis; ‡ Overall score calculated as (intensity score) plus (percent cells positive score) as described in methods; §PR Positive rate.
* Compared with non-tumoral gastric mucosa, p < 0.001.
Figure 2Correlation of GCRG213p immunostaining score in primary gastric cancer with tumor differentiation. Overall Score (OS) of immunostaining is higher in the well-differentiated cancer than that in the poor-differentiated (p = 0.001).
Figure 3Western blotting analysis of whole cell extract from gastric malignant and non-malignant cells using anti-GCRG213p antibody. Cells express GCRG213p with protein bands of 35-kDa. 1:GES-1,2:SGC-7901;3:BGC-823. The filter was reprobed with anti-β-actin antibody to control for equal loading (bottom panel).
Figure 4Methylation-specific PCR (MSP) analysis of . Agarose gel electrophoresis of MSP products. M: product amplified with methylated-specific primer; U: product amplified with unmethylated-specific primer. PC: positive control, human methylated DNA standard; W: double distilled water control. Note that the GES-1 samples solely show methylated PCR products, while the MGC-803, SGC-7901 and BGC-823 samples show both methylated and unmethylated PCR products.
Figure 5Alignment of GCRG213p and L1-EN. Red font represents high consensus, blue or black font represents low consensus. GCRG213p contained residues (arrowed) that are important for the endonuclease activity of L1-EN.