Literature DB >> 23716017

4-Hydroxyphenylacetate decarboxylase activating enzyme catalyses a classical S-adenosylmethionine reductive cleavage reaction.

Brinda Selvaraj1, Antonio J Pierik, Eckhard Bill, Berta M Martins.   

Abstract

4-Hydroxyphenylacetate decarboxylase (4Hpad) is an Fe/S cluster containing glycyl radical enzyme (GRE), which catalyses the last step of tyrosine fermentation in clostridia, generating the bacteriostatic p-cresol. The respective activating enzyme (4Hpad-AE) displays two cysteine-rich motifs in addition to the classical S-adenosylmethionine (SAM) binding cluster (RS cluster) motif. These additional motifs are also present in other glycyl radical activating enzymes (GR-AE) and it has been postulated that these orthologues may use an alternative SAM homolytic cleavage mechanism, generating a putative 3-amino-3-carboxypropyl radical and 5'-deoxy-5'-(methylthio)adenosine but not a 5'-deoxyadenosyl radical and methionine. 4Hpad-AE produced from a codon-optimized synthetic gene binds a maximum of two [4Fe-4S](2+/+) clusters as revealed by EPR and Mössbauer spectroscopy. The enzyme only catalyses the turnover of SAM under reducing conditions, and the reaction products were identified as 5'-deoxyadenosine (quenched form of 5'-deoxyadenosyl radical) and methionine. We demonstrate that the 5'-deoxyadenosyl radical is the activating agent for 4Hpad through p-cresol formation and correlation between the production of 5'-deoxyadenosine and the generation of glycyl radical in 4Hpad. Therefore, we conclude that 4Hpad-AE catalyses a classical SAM-dependent glycyl radical formation as reported for GR-AE without auxiliary clusters. Our observation casts doubt on the suggestion that GR-AE containing auxiliary clusters catalyse the alternative cleavage reaction detected for glycerol dehydratase activating enzyme.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23716017     DOI: 10.1007/s00775-013-1008-2

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  39 in total

1.  Identification of FeS clusters in the glycyl-radical enzyme benzylsuccinate synthase via EPR and Mössbauer spectroscopy.

Authors:  Markus Hilberg; Antonio J Pierik; Eckhard Bill; Thorsten Friedrich; Marie-Luise Lippert; Johann Heider
Journal:  J Biol Inorg Chem       Date:  2011-08-12       Impact factor: 3.358

2.  Radical SAM activation of the B12-independent glycerol dehydratase results in formation of 5'-deoxy-5'-(methylthio)adenosine and not 5'-deoxyadenosine.

Authors:  Jonathan M Demick; William N Lanzilotta
Journal:  Biochemistry       Date:  2011-01-05       Impact factor: 3.162

Review 3.  Control of radical chemistry in the AdoMet radical enzymes.

Authors:  Kaitlin S Duschene; Susan E Veneziano; Sunshine C Silver; Joan B Broderick
Journal:  Curr Opin Chem Biol       Date:  2009-03-09       Impact factor: 8.822

4.  Radical SAM enzymes and radical enzymology.

Authors:  Squire J Booker
Journal:  Biochim Biophys Acta       Date:  2012-07-22

5.  Rapid colorimetric micromethod for the quantitation of complexed iron in biological samples.

Authors:  W W Fish
Journal:  Methods Enzymol       Date:  1988       Impact factor: 1.600

6.  The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications.

Authors:  P M Sharp; W H Li
Journal:  Nucleic Acids Res       Date:  1987-02-11       Impact factor: 16.971

Review 7.  New glycyl radical enzymes catalysing key metabolic steps in anaerobic bacteria.

Authors:  Thorsten Selmer; Antonio J Pierik; Johann Heider
Journal:  Biol Chem       Date:  2005-10       Impact factor: 3.915

8.  Structural basis for a Kolbe-type decarboxylation catalyzed by a glycyl radical enzyme.

Authors:  Berta M Martins; Martin Blaser; Mikolaj Feliks; G Matthias Ullmann; Wolfgang Buckel; Thorsten Selmer
Journal:  J Am Chem Soc       Date:  2011-08-26       Impact factor: 15.419

9.  Structural basis for glycyl radical formation by pyruvate formate-lyase activating enzyme.

Authors:  Jessica L Vey; Jian Yang; Meng Li; William E Broderick; Joan B Broderick; Catherine L Drennan
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-13       Impact factor: 11.205

10.  Subunit structure of benzylsuccinate synthase.

Authors:  Lei Li; Dustin P Patterson; Christel C Fox; Brian Lin; Peter W Coschigano; E Neil G Marsh
Journal:  Biochemistry       Date:  2009-02-17       Impact factor: 3.162

View more
  4 in total

1.  The ferredoxin-like domain of the activating enzyme is required for generating a lasting glycyl radical in 4-hydroxyphenylacetate decarboxylase.

Authors:  Brinda Selvaraj; Antonio J Pierik; Eckhard Bill; Berta M Martins
Journal:  J Biol Inorg Chem       Date:  2014-08-26       Impact factor: 3.358

Review 2.  Radical S-adenosylmethionine enzymes.

Authors:  Joan B Broderick; Benjamin R Duffus; Kaitlin S Duschene; Eric M Shepard
Journal:  Chem Rev       Date:  2014-01-29       Impact factor: 60.622

3.  The B12-independent glycerol dehydratase activating enzyme from Clostridium butyricum cleaves SAM to produce 5'-deoxyadenosine and not 5'-deoxy-5'-(methylthio)adenosine.

Authors:  William G Walls; James D Moody; Elizabeth C McDaniel; Maria Villanueva; Eric M Shepard; William E Broderick; Joan B Broderick
Journal:  J Inorg Biochem       Date:  2021-11-12       Impact factor: 4.155

Review 4.  New tricks for the glycyl radical enzyme family.

Authors:  Lindsey R F Backman; Michael A Funk; Christopher D Dawson; Catherine L Drennan
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-09-13       Impact factor: 8.250

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.