Literature DB >> 23684965

Fourier ring correlation as a resolution criterion for super-resolution microscopy.

Niccolò Banterle1, Khanh Huy Bui1, Edward A Lemke2, Martin Beck3.   

Abstract

Optical nanoscopy techniques using localization based image reconstruction, also termed super-resolution microscopy (SRM), have become a standard tool to bypass the diffraction limit in fluorescence light microscopy. The localization precision measured for the detected fluorophores is commonly used to describe the maximal attainable resolution. However, this measure takes not all experimental factors, which impact onto the finally achieved resolution, into account. Several other methods to measure the resolution of super-resolved images were previously suggested, typically relying on intrinsic standards, such as molecular rulers, or on a priori knowledge about the specimen, e.g. its spatial frequency content. Here we show that Fourier ring correlation provides an easy-to-use, laboratory consistent standard for measuring the resolution of SRM images. We provide a freely available software tool that combines resolution measurement with image reconstruction.
Copyright © 2013 Elsevier Inc. All rights reserved.

Keywords:  Fourier ring correlation; Resolution; Super-resolution microscopy

Mesh:

Year:  2013        PMID: 23684965     DOI: 10.1016/j.jsb.2013.05.004

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  72 in total

Review 1.  Three-Dimensional Localization of Single Molecules for Super-Resolution Imaging and Single-Particle Tracking.

Authors:  Lexy von Diezmann; Yoav Shechtman; W E Moerner
Journal:  Chem Rev       Date:  2017-02-02       Impact factor: 60.622

2.  Quantitative evaluation of software packages for single-molecule localization microscopy.

Authors:  Daniel Sage; Hagai Kirshner; Thomas Pengo; Nico Stuurman; Junhong Min; Suliana Manley; Michael Unser
Journal:  Nat Methods       Date:  2015-06-15       Impact factor: 28.547

3.  Unraveling the Thousand Word Picture: An Introduction to Super-Resolution Data Analysis.

Authors:  Antony Lee; Konstantinos Tsekouras; Christopher Calderon; Carlos Bustamante; Steve Pressé
Journal:  Chem Rev       Date:  2017-04-17       Impact factor: 60.622

4.  Improved localization accuracy in stochastic super-resolution fluorescence microscopy by K-factor image deshadowing.

Authors:  Tali Ilovitsh; Amihai Meiri; Carl G Ebeling; Rajesh Menon; Jordan M Gerton; Erik M Jorgensen; Zeev Zalevsky
Journal:  Biomed Opt Express       Date:  2013-12-16       Impact factor: 3.732

Review 5.  Precisely and accurately localizing single emitters in fluorescence microscopy.

Authors:  Hendrik Deschout; Francesca Cella Zanacchi; Michael Mlodzianoski; Alberto Diaspro; Joerg Bewersdorf; Samuel T Hess; Kevin Braeckmans
Journal:  Nat Methods       Date:  2014-03       Impact factor: 28.547

6.  A simple method to estimate the average localization precision of a single-molecule localization microscopy experiment.

Authors:  Ulrike Endesfelder; Sebastian Malkusch; Franziska Fricke; Mike Heilemann
Journal:  Histochem Cell Biol       Date:  2014-02-13       Impact factor: 4.304

7.  SuReSim: simulating localization microscopy experiments from ground truth models.

Authors:  Varun Venkataramani; Frank Herrmannsdörfer; Mike Heilemann; Thomas Kuner
Journal:  Nat Methods       Date:  2016-02-29       Impact factor: 28.547

8.  Reducing cryoEM file storage using lossy image formats.

Authors:  Edward T Eng; Mykhailo Kopylov; Carl J Negro; Sarkis Dallaykan; William J Rice; Kelsey D Jordan; Kotaro Kelley; Bridget Carragher; Clinton S Potter
Journal:  J Struct Biol       Date:  2019-05-21       Impact factor: 2.867

9.  Adaptive optics stochastic optical reconstruction microscopy (AO-STORM) by particle swarm optimization.

Authors:  Kayvan F Tehrani; Yiwen Zhang; Ping Shen; Peter Kner
Journal:  Biomed Opt Express       Date:  2017-10-19       Impact factor: 3.732

10.  The Role of Probe Photophysics in Localization-Based Superresolution Microscopy.

Authors:  Francesca Pennacchietti; Travis J Gould; Samuel T Hess
Journal:  Biophys J       Date:  2017-11-07       Impact factor: 4.033

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