Literature DB >> 29188105

Adaptive optics stochastic optical reconstruction microscopy (AO-STORM) by particle swarm optimization.

Kayvan F Tehrani1,2, Yiwen Zhang3, Ping Shen3, Peter Kner1.   

Abstract

Stochastic optical reconstruction microscopy (STORM) can achieve resolutions of better than 20nm imaging single fluorescently labeled cells. However, when optical aberrations induced by larger biological samples degrade the point spread function (PSF), the localization accuracy and number of localizations are both reduced, destroying the resolution of STORM. Adaptive optics (AO) can be used to correct the wavefront, restoring the high resolution of STORM. A challenge for AO-STORM microscopy is the development of robust optimization algorithms which can efficiently correct the wavefront from stochastic raw STORM images. Here we present the implementation of a particle swarm optimization (PSO) approach with a Fourier metric for real-time correction of wavefront aberrations during STORM acquisition. We apply our approach to imaging boutons 100 μm deep inside the central nervous system (CNS) of Drosophila melanogaster larvae achieving a resolution of 146 nm.

Entities:  

Keywords:  (010.7350) Wave-front sensing; (100.3008) Image recognition, algorithms and filters; (110.7348) Aberration compensation; (180.2520) Fluorescence microscopy; (220.1080) Active or adaptive optics

Year:  2017        PMID: 29188105      PMCID: PMC5695955          DOI: 10.1364/BOE.8.005087

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  30 in total

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2.  Smart microscope: an adaptive optics learning system for aberration correction in multiphoton confocal microscopy.

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Journal:  Opt Lett       Date:  2000-01-01       Impact factor: 3.776

3.  Phase retrieval from intensity-only data by relative entropy minimization.

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Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2007-11       Impact factor: 2.129

4.  Closed loop adaptive optics for microscopy without a wavefront sensor.

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Journal:  Proc SPIE Int Soc Opt Eng       Date:  2010-02-24

5.  Real-time computation of subdiffraction-resolution fluorescence images.

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7.  Numerical study of multi-conjugate large area wavefront correction for deep tissue microscopy.

Authors:  Tsai-wei Wu; Meng Cui
Journal:  Opt Express       Date:  2015-03-23       Impact factor: 3.894

8.  Wavefront sensorless adaptive optics for large aberrations.

Authors:  Martin J Booth
Journal:  Opt Lett       Date:  2007-01-01       Impact factor: 3.776

9.  Light-sheet confined super-resolution using two-photon photoactivation.

Authors:  Francesca Cella Zanacchi; Zeno Lavagnino; Mario Faretta; Laura Furia; Alberto Diaspro
Journal:  PLoS One       Date:  2013-07-02       Impact factor: 3.240

10.  Whole-cell 3D STORM reveals interactions between cellular structures with nanometer-scale resolution.

Authors:  Bo Huang; Sara A Jones; Boerries Brandenburg; Xiaowei Zhuang
Journal:  Nat Methods       Date:  2008-11-23       Impact factor: 28.547

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3.  Three-Dimensional Single-Molecule Localization Microscopy in Whole-Cell and Tissue Specimens.

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4.  Optical imaging featuring both long working distance and high spatial resolution by correcting the aberration of a large aperture lens.

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Journal:  Sci Rep       Date:  2018-06-15       Impact factor: 4.379

5.  Spatial frequency metrics for analysis of microscopic images of musculoskeletal tissues.

Authors:  Kayvan Forouhesh Tehrani; Emily G Pendleton; W Michael Southern; Jarrod A Call; Luke J Mortensen
Journal:  Connect Tissue Res       Date:  2020-10-07       Impact factor: 3.417

  5 in total

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