Literature DB >> 23671730

Epigenetic field defects in progression to cancer.

Carol Bernstein1, Valentine Nfonsam, Anil Ramarao Prasad, Harris Bernstein.   

Abstract

A field defect is a field of pre-malignant tissue in which a new cancer is likely to arise. Field defects often appear to be histologically normal under the microscope. Recent research indicates that cells within a field defect characteristically have an increased frequency of epigenetic alterations and these may be fundamentally important as underlying factors in progression to cancer. However, understanding of epigenetic field defects is at an early stage, and the work of Katsurano et al published this year, is a key contribution to this field. One question examined by Katsurano et al was how early could the formation of an epigenetic field defect be detected in a mouse colitis model of tumorigenesis. They highlighted a number of measurable epigenetic alterations, detected very early in normal appearing tissue undergoing histologically invisible tumorigenesis. They also documented the increasing presence of the epigenetic alterations at successive times during progression to cancer. In this commentary, we offer a perspective on the changes they observed within a broader sequence of epigenetic events that occur in progression to cancer. In particular, we highlight the likely central role of epigenetic deficiencies in DNA repair gene expression that arise during progression to cancer.

Entities:  

Keywords:  Carcinogenesis; Colon cancer; DNA damage; DNA repair; Epigenetics; Field defect; Human; Mouse; Tumorigenesis

Year:  2013        PMID: 23671730      PMCID: PMC3648662          DOI: 10.4251/wjgo.v5.i3.43

Source DB:  PubMed          Journal:  World J Gastrointest Oncol


  43 in total

1.  Genetic reconstruction of individual colorectal tumor histories.

Authors:  J L Tsao; Y Yatabe; R Salovaara; H J Järvinen; J P Mecklin; L A Aaltonen; S Tavaré; D Shibata
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-01       Impact factor: 11.205

Review 2.  A novel application of the Margin of Exposure approach: segregation of tobacco smoke toxicants.

Authors:  F H Cunningham; S Fiebelkorn; M Johnson; C Meredith
Journal:  Food Chem Toxicol       Date:  2011-07-23       Impact factor: 6.023

3.  Modulation of mismatch repair and genomic stability by miR-155.

Authors:  Nicola Valeri; Pierluigi Gasparini; Muller Fabbri; Chiara Braconi; Angelo Veronese; Francesca Lovat; Brett Adair; Ivan Vannini; Francesca Fanini; Arianna Bottoni; Stefan Costinean; Sukhinder K Sandhu; Gerard J Nuovo; Hansjuerg Alder; Roberta Gafa; Federica Calore; Manuela Ferracin; Giovanni Lanza; Stefano Volinia; Massimo Negrini; Michael A McIlhatton; Dino Amadori; Richard Fishel; Carlo M Croce
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-29       Impact factor: 11.205

4.  Early-stage formation of an epigenetic field defect in a mouse colitis model, and non-essential roles of T- and B-cells in DNA methylation induction.

Authors:  M Katsurano; T Niwa; Y Yasui; Y Shigematsu; S Yamashita; H Takeshima; M S Lee; Y-J Kim; T Tanaka; T Ushijima
Journal:  Oncogene       Date:  2011-06-20       Impact factor: 9.867

Review 5.  Human cancers express mutator phenotypes: origin, consequences and targeting.

Authors:  Lawrence A Loeb
Journal:  Nat Rev Cancer       Date:  2011-05-19       Impact factor: 60.716

6.  Epigenetic silencing of the intronic microRNA hsa-miR-342 and its host gene EVL in colorectal cancer.

Authors:  W M Grady; R K Parkin; P S Mitchell; J H Lee; Y-H Kim; K D Tsuchiya; M K Washington; C Paraskeva; J K V Willson; A M Kaz; E M Kroh; A Allen; B R Fritz; S D Markowitz; M Tewari
Journal:  Oncogene       Date:  2008-02-11       Impact factor: 9.867

7.  Endogenously induced DNA double strand breaks arise in heterochromatic DNA regions and require ataxia telangiectasia mutated and Artemis for their repair.

Authors:  Lisa Woodbine; H Brunton; A A Goodarzi; A Shibata; P A Jeggo
Journal:  Nucleic Acids Res       Date:  2011-05-19       Impact factor: 16.971

8.  Carcinogenicity of deoxycholate, a secondary bile acid.

Authors:  Carol Bernstein; Hana Holubec; Achyut K Bhattacharyya; Huy Nguyen; Claire M Payne; Beryl Zaitlin; Harris Bernstein
Journal:  Arch Toxicol       Date:  2011-01-26       Impact factor: 5.153

9.  The stem cell population of the human colon crypt: analysis via methylation patterns.

Authors:  Pierre Nicolas; Kyoung-Mee Kim; Darryl Shibata; Simon Tavaré
Journal:  PLoS Comput Biol       Date:  2007-01-02       Impact factor: 4.475

Review 10.  Redox biology and gastric carcinogenesis: the role of Helicobacter pylori.

Authors:  Osamu Handa; Yuji Naito; Toshikazu Yoshikawa
Journal:  Redox Rep       Date:  2011       Impact factor: 4.412

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  18 in total

Review 1.  Field cancerisation in colorectal cancer: a new frontier or pastures past?

Authors:  Abhilasha Patel; Gyanendra Tripathi; Kishore Gopalakrishnan; Nigel Williams; Ramesh P Arasaradnam
Journal:  World J Gastroenterol       Date:  2015-04-07       Impact factor: 5.742

2.  Nano-architectural alterations in mucus layer fecal colonocytes in field carcinogenesis: potential for screening.

Authors:  Hemant K Roy; Dhwanil P Damania; Mart DelaCruz; Dhananjay P Kunte; Hariharan Subramanian; Susan E Crawford; Ashish K Tiwari; Ramesh K Wali; Vadim Backman
Journal:  Cancer Prev Res (Phila)       Date:  2013-08-27

3.  Effects on DNA Damage and/or Repair Processes as Biological Mechanisms Linking Psychological Stress to Cancer Risk.

Authors:  Frank J Jenkins; Bennett Van Houten; Dana H Bovbjerg
Journal:  J Appl Biobehav Res       Date:  2014-02-01

4.  The potential role of PHF6 as an oncogene: a genotranscriptomic/proteomic meta-analysis.

Authors:  Mohammadreza Hajjari; Abbas Salavaty; Francesco Crea; Young Kee Shin
Journal:  Tumour Biol       Date:  2015-11-11

5.  Spectral biomarkers for chemoprevention of colonic neoplasia: a placebo-controlled double-blinded trial with aspirin.

Authors:  Hemant K Roy; Vladimir Turzhitsky; Ramesh Wali; Andrew J Radosevich; Borko Jovanovic; Gary Della'Zanna; Asad Umar; David T Rubin; Michael J Goldberg; Laura Bianchi; Mart De La Cruz; Andrej Bogojevic; Irene B Helenowski; Luz Rodriguez; Robert Chatterton; Silvia Skripkauskas; Katherine Page; Christopher R Weber; Xiaoke Huang; Ellen Richmond; Raymond C Bergan; Vadim Backman
Journal:  Gut       Date:  2015-10-26       Impact factor: 23.059

6.  Detection of epigenetic field defects using a weighted epigenetic distance-based method.

Authors:  Ya Wang; Min Qian; Peifeng Ruan; Andrew E Teschendorff; Shuang Wang
Journal:  Nucleic Acids Res       Date:  2019-01-10       Impact factor: 16.971

7.  Enhancing and initiating phage-based therapies.

Authors:  Philip Serwer; Elena T Wright; Juan T Chang; Xiangan Liu
Journal:  Bacteriophage       Date:  2014-12-15

8.  Stochastic epigenetic outliers can define field defects in cancer.

Authors:  Andrew E Teschendorff; Allison Jones; Martin Widschwendter
Journal:  BMC Bioinformatics       Date:  2016-04-22       Impact factor: 3.169

9.  DNA methylation outliers in normal breast tissue identify field defects that are enriched in cancer.

Authors:  Andrew E Teschendorff; Yang Gao; Allison Jones; Matthias Ruebner; Matthias W Beckmann; David L Wachter; Peter A Fasching; Martin Widschwendter
Journal:  Nat Commun       Date:  2016-01-29       Impact factor: 14.919

10.  The loss of ATP2C1 impairs the DNA damage response and induces altered skin homeostasis: Consequences for epidermal biology in Hailey-Hailey disease.

Authors:  Samantha Cialfi; Loredana Le Pera; Carlo De Blasio; Germano Mariano; Rocco Palermo; Azzurra Zonfrilli; Daniela Uccelletti; Claudio Palleschi; Gianfranco Biolcati; Luca Barbieri; Isabella Screpanti; Claudio Talora
Journal:  Sci Rep       Date:  2016-08-16       Impact factor: 4.379

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