Literature DB >> 23662805

The paradox of elongation factor 4: highly conserved, yet of no physiological significance?

Dejiu Zhang1, Yan Qin.   

Abstract

LepA [EF4 (elongation factor 4)] is a highly conserved protein found in nearly all known genomes. EF4 triggers back-translocation of the elongating ribosome, causing the translation machinery to move one codon backwards along the mRNA. Knockout of the corresponding gene in various bacteria results in different phenotypes; however, the physiological function of the factor in vivo is unclear. Although functional research on Guf1 (GTPase of unknown function 1), the eukaryotic homologue of EF4, showed that it plays a critical role under suboptimal translation conditions in vivo, its detailed mechanism has yet to be identified. In the present review we briefly cover recent advances in our understanding of EF4, including in vitro structural and biochemical studies, and research on its physiological role in vivo. Lastly, we present a hypothesis for back-translocation and discuss the directions future EF4 research should focus on.

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Year:  2013        PMID: 23662805     DOI: 10.1042/BJ20121792

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  14 in total

1.  EF4 disengages the peptidyl-tRNA CCA end and facilitates back-translocation on the 70S ribosome.

Authors:  Dejiu Zhang; Kaige Yan; Guangqiao Liu; Guangtao Song; Jiejian Luo; Yi Shi; Erchao Cheng; Shan Wu; Taijiao Jiang; Jizhong Lou; Ning Gao; Yan Qin
Journal:  Nat Struct Mol Biol       Date:  2016-01-25       Impact factor: 15.369

2.  Enhancement of Alpha 1-antitrypsin Production in Pichia pastoris by Designing and Optimizing Medium Using Elemental Analysis.

Authors:  Tina Tavasoli; Sareh Arjmand; Seyed Omid Ranaei Siadat; Seyed Abbas Shojaosadati; Abbas Sahebghadam Lotfi
Journal:  Iran J Biotechnol       Date:  2017-12-29       Impact factor: 1.671

3.  West syndrome caused by homozygous variant in the evolutionary conserved gene encoding the mitochondrial elongation factor GUF1.

Authors:  Ali Abdullah Alfaiz; Verena Müller; Nadia Boutry-Kryza; Dorothée Ville; Nicolas Guex; Julitta de Bellescize; Clotilde Rivier; Audrey Labalme; Vincent des Portes; Patrick Edery; Marianne Till; Ioannis Xenarios; Damien Sanlaville; Johannes M Herrmann; Gaétan Lesca; Alexandre Reymond
Journal:  Eur J Hum Genet       Date:  2015-10-21       Impact factor: 4.246

4.  EF-G catalyzes tRNA translocation by disrupting interactions between decoding center and codon-anticodon duplex.

Authors:  Guangqiao Liu; Guangtao Song; Danyang Zhang; Dejiu Zhang; Zhikai Li; Zhixin Lyu; Jianshu Dong; John Achenbach; Weimin Gong; Xin Sheng Zhao; Knud H Nierhaus; Yan Qin
Journal:  Nat Struct Mol Biol       Date:  2014-08-10       Impact factor: 15.369

5.  EF4 reveals the energy barrier for tRNA back-translocation in the peptidyl transferase center.

Authors:  Guangtao Song; Yan Qin
Journal:  RNA Biol       Date:  2016-07-29       Impact factor: 4.652

6.  Mammalian elongation factor 4 regulates mitochondrial translation essential for spermatogenesis.

Authors:  Yanyan Gao; Xiufeng Bai; Dejiu Zhang; Chunsheng Han; Jing Yuan; Wenbin Liu; Xintao Cao; Zilei Chen; Fugen Shangguan; Zhenyuan Zhu; Fei Gao; Yan Qin
Journal:  Nat Struct Mol Biol       Date:  2016-04-11       Impact factor: 15.369

7.  Elongation factor 4 remodels the A-site tRNA on the ribosome.

Authors:  Matthieu G Gagnon; Jinzhong Lin; Thomas A Steitz
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-18       Impact factor: 11.205

8.  Crystal structure of elongation factor 4 bound to a clockwise ratcheted ribosome.

Authors:  Matthieu G Gagnon; Jinzhong Lin; David Bulkley; Thomas A Steitz
Journal:  Science       Date:  2014-08-08       Impact factor: 63.714

9.  The evolutionary and functional diversity of classical and lesser-known cytoplasmic and organellar translational GTPases across the tree of life.

Authors:  Gemma Catherine Atkinson
Journal:  BMC Genomics       Date:  2015-02-14       Impact factor: 3.969

10.  Ribosomal elongation factor 4 promotes cell death associated with lethal stress.

Authors:  Liping Li; Yuzhi Hong; Gan Luan; Michael Mosel; Muhammad Malik; Karl Drlica; Xilin Zhao
Journal:  MBio       Date:  2014-12-09       Impact factor: 7.867

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