Literature DB >> 23654306

Structural studies of RNase P.

Alfonso Mondragón1.   

Abstract

Ribonuclease P (RNase P) is one of the first ribozymes discovered and it is found in all phylogenetic groups. It is responsible for processing the 5' end of pre-tRNAs as well as other RNA molecules. RNase P is formed by an RNA molecule responsible for catalysis and one or more proteins. Structural studies of the proteins from different organisms, the bacterial RNA component, and a bacterial RNase P holoenzyme/tRNA complex provide insights into the mechanism of this universal ribozyme. Together with the existing wealth of biochemical information, these studies provide atomic-level information on the mechanism of RNase P and continue to expand our understanding of the structure and architecture of large RNA molecules and ribonucleoprotein complexes, the nature of catalysis by ribozymes, the structural basis of recognition of RNA by RNA molecules, and the evolution of enzymes from the prebiotic, RNA-based world to the modern world.

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Year:  2013        PMID: 23654306     DOI: 10.1146/annurev-biophys-083012-130406

Source DB:  PubMed          Journal:  Annu Rev Biophys        ISSN: 1936-122X            Impact factor:   12.981


  34 in total

1.  Structural basis for diversity in the SAM clan of riboswitches.

Authors:  Jeremiah J Trausch; Zhenjiang Xu; Andrea L Edwards; Francis E Reyes; Phillip E Ross; Rob Knight; Robert T Batey
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-21       Impact factor: 11.205

Review 2.  The ribosome challenge to the RNA world.

Authors:  Jessica C Bowman; Nicholas V Hud; Loren Dean Williams
Journal:  J Mol Evol       Date:  2015-03-05       Impact factor: 2.395

3.  The rph-1-Encoded Truncated RNase PH Protein Inhibits RNase P Maturation of Pre-tRNAs with Short Leader Sequences in the Absence of RppH.

Authors:  Katherine E Bowden; Nicholas S Wiese; Tariq Perwez; Bijoy K Mohanty; Sidney R Kushner
Journal:  J Bacteriol       Date:  2017-10-17       Impact factor: 3.490

4.  Oligomerization of a Bimolecular Ribozyme Modestly Rescues its Structural Defects that Disturb Interdomain Assembly to Form the Catalytic Site.

Authors:  Md Motiar Rahman; Shigeyoshi Matsumura; Yoshiya Ikawa
Journal:  J Mol Evol       Date:  2018-08-14       Impact factor: 2.395

5.  Wobble pairs of the HDV ribozyme play specific roles in stabilization of active site dynamics.

Authors:  Kamali N Sripathi; Pavel Banáš; Kamila Réblová; Jiří Šponer; Michal Otyepka; Nils G Walter
Journal:  Phys Chem Chem Phys       Date:  2015-02-28       Impact factor: 3.676

Review 6.  New molecular engineering approaches for crystallographic studies of large RNAs.

Authors:  Jinwei Zhang; Adrian R Ferré-D'Amaré
Journal:  Curr Opin Struct Biol       Date:  2014-03-06       Impact factor: 6.809

Review 7.  External guide sequence technology: a path to development of novel antimicrobial therapeutics.

Authors:  Carol Davies-Sala; Alfonso Soler-Bistué; Robert A Bonomo; Angeles Zorreguieta; Marcelo E Tolmasky
Journal:  Ann N Y Acad Sci       Date:  2015-04-09       Impact factor: 5.691

8.  Detecting riboSNitches with RNA folding algorithms: a genome-wide benchmark.

Authors:  Meredith Corley; Amanda Solem; Kun Qu; Howard Y Chang; Alain Laederach
Journal:  Nucleic Acids Res       Date:  2015-01-23       Impact factor: 16.971

9.  NMR resonance assignments of RNase P protein from Thermotoga maritima.

Authors:  Danyun Zeng; Benjamin P Brown; Markus W Voehler; Sheng Cai; Nicholas J Reiter
Journal:  Biomol NMR Assign       Date:  2018-02-15       Impact factor: 0.746

10.  Structural Roles of Noncoding RNAs in the Heart of Enzymatic Complexes.

Authors:  William J Martin; Nicholas J Reiter
Journal:  Biochemistry       Date:  2016-12-29       Impact factor: 3.162

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