| Literature DB >> 23653493 |
Mehmet Sait Taylan1, Claudio Di Russo, Mauro Rampini, Valerio Ketmaier.
Abstract
This study focuses on the evolutionary relationships among Turkish species of the cave cricket genus Troglophilus.Fifteen populations were studied for sequence variation in a fragment (543 base pairs) of the mitochondrial DNA (mtDNA) 16S rDNA gene (16S) to reconstruct their phylogenetic relationships and biogeographic history. Genetic data retrieved three main clades and at least three divergent lineages that could not be attributed to any of the taxa known for the area. Molecular time estimates suggest that the diversification of the group took place between the Messinian and the Plio-Pleistocene.Entities:
Keywords: 16S rDNA; Orthoptera; Rhaphidophoridae; Troglophilus; cave crickets; mitochondrial DNA; molecular systematics
Year: 2013 PMID: 23653493 PMCID: PMC3591738 DOI: 10.3897/zookeys.257.4133
Source DB: PubMed Journal: Zookeys ISSN: 1313-2970 Impact factor: 1.546
Figure 1.Geographic position of the fifteen caves were we sampled the populations analyzed in the study. Numbers correspond to those in Table 1. The lower half of the figure depicts the phylogeography of in Turkey (for details see Discussion); colors of clades match those in Figure 2.
Species list and details of the sampling localities of Turkish populations and species. Numbers in the first column match those in Figure 1.
| No | Species | Cave name | Locality | N (north), E (east) | Date | Altitude (m a.s.l.) | |
|---|---|---|---|---|---|---|---|
| 1 | Epigian forest | Artvin, Kafkasor | 29–30/06/2000 | 1300 | |||
| 2 | Havran cave | Balıkesir, Havran | 01/11/2008 | 115 | |||
| 3 | Gökçeler cave | Muğla, Milas | 25/11/2008 | 120 | |||
| 4 | Güroluk cave | Muğla, Fethiye | 26/06/2008 | 450 | |||
| 5 | Zindan cave | Isparta, Aksu | 03/05/2009 | 1286 | |||
| 6 | Direkliin cave | Konya, Beyşehir | 02/07/2008 | 1209 | |||
| 7 | Bıçakçı cave | Konya, Derebucak | 23/08/2009 | 1372 | |||
| 8 | Balatini cave | Konya, Derebucak | 22/08/2009 | 1379 | |||
| 9 | Feyzullah cave | Konya, Derebucak | 22/08/2009 | 1508 | |||
| 10 | Ferzene cave | Konya, Seydişehir | 24/08/2009 | 1390 | |||
| 11 | Ferzene cave | Konya, Seydişehir | 24/08/2009 | 1390 | |||
| 12 | Tınaztepe cave | Konya, Seydişehir | 24/08/2009 | 1461 | |||
| 13 | Dim cave | Antalya, Alanya | 30/08/2009 | 232 | |||
| 14 | Cennet cave | Içel, Silifke | 05/06/2009 | 135 | |||
| 15 | Döngel cave | Maraş, Narliseki | 06/06/2009 | 647 | |||
species included in this study, the names of the sampling locations, their sample size per locality (N), number of haplotypes, the codes of the haplotypes as they appear in Figure 1 and 2.
| Kafkasor | Artvin | 1 | 1 | Ttat-kaf1 | |
| Güroluk cave | Muğla, Fethiye | 3 | 1 | Tsp1-gur1 | |
| Gökçeler cave | Muğla, Milas | 1 | 1 | Tsp1-gok1 | |
| Havran Cave | Balıkesir, Havran | 3 | 1 | Tsp4-hav1 | |
| Döngel cave | K.Maraş, Döngel | 3 | 1 | Tesc-don1 | |
| Cennet cave | İçel, Silifke | 5 | 1 | Tgaj-cen1 | |
| Zindan cave | Isparta, Aksu | 4 | 1 | Tada-zin1 | |
| Tınaztepe cave | Konya, Seydişehir | 2 | 1 | Tada-tin1 | |
| Ferzene cave | Konya, Seydişehir | 1 | 1 | Tada-fer1 | |
| Bıçakçı cave | Konya, Derebucak | 2 | 2 | Tbic-bic1, Tbic-bic2 | |
| Direkliin cave | Konya, Beyşehir | 2 | 1 | Tbic-dir1 | |
| Feyzullah cave | Konya, Derebucak | 2 | 1 | Tbic-fey1 | |
| Balatini cave | Konya, Derebucak | 2 | 1 | Tbic-bal1 | |
| Ferzene cave | Konya, Seydişehir | 2 | 2 | Tsp2-fer1, Tsp2-fer2 | |
| Dim Cave | Antalya, Alanya | 5 | 2 | Tsp3-dim1,Tsp3-dim2 | |
Figure 2.Bayesian phylogram among haplotypes from Turkey. Haplotype codes match those in Table 2. Numbers at nodes are statistical supports for the Bayesian and MP searches (first and second value, respectively); only values ≥ 75% are reported. The three supported clusters are described in the text are highlighted here in blue (clade 1), red (clade 2) and green (clade 3). Bold values are node ages (in Myr %) as obtained by the BEAST analyses; 95% HPD intervals are shown in parentheses.