Literature DB >> 23640422

Gene duplication as a major force in evolution.

Santoshkumar Magadum1, Urbi Banerjee, Priyadharshini Murugan, Doddabhimappa Gangapur, Rajasekar Ravikesavan.   

Abstract

Gene duplication is an important mechanism for acquiring new genes and creating genetic novelty in organisms. Many new gene functions have evolved through gene duplication and it has contributed tremendously to the evolution of developmental programmes in various organisms. Gene duplication can result from unequal crossing over, retroposition or chromosomal (or genome) duplication. Understanding the mechanisms that generate duplicate gene copies and the subsequent dynamics among gene duplicates is vital because these investigations shed light on localized and genomewide aspects of evolutionary forces shaping intra-specific and inter-specific genome contents, evolutionary relationships, and interactions. Based on whole-genome analysis of Arabidopsis thaliana, there is compelling evidence that angiosperms underwent two whole-genome duplication events early during their evolutionary history. Recent studies have shown that these events were crucial for creation of many important developmental and regulatory genes found in extant angiosperm genomes. Recent studies also provide strong indications that even yeast (Saccharomyces cerevisiae), with its compact genome, is in fact an ancient tetraploid. Gene duplication can provide new genetic material for mutation, drift and selection to act upon, the result of which is specialized or new gene functions. Without gene duplication the plasticity of a genome or species in adapting to changing environments would be severely limited. Whether a duplicate is retained depends upon its function, its mode of duplication, (i.e. whether it was duplicated during a whole-genome duplication event), the species in which it occurs, and its expression rate. The exaptation of preexisting secondary functions is an important feature in gene evolution, just as it is in morphological evolution.

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Year:  2013        PMID: 23640422     DOI: 10.1007/s12041-013-0212-8

Source DB:  PubMed          Journal:  J Genet        ISSN: 0022-1333            Impact factor:   1.166


  43 in total

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Journal:  Nature       Date:  1999-12-16       Impact factor: 49.962

5.  Molecular evidence for an ancient duplication of the entire yeast genome.

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Journal:  Nature       Date:  1997-06-12       Impact factor: 49.962

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7.  Inferences on the genome structure of progenitor maize through comparative analysis of rice, maize and the domesticated panicoids.

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Journal:  Genetics       Date:  1999-09       Impact factor: 4.562

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Authors:  Guillaume Blanc; Kenneth H Wolfe
Journal:  Plant Cell       Date:  2004-06-18       Impact factor: 11.277

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Authors:  T Jonathan Davies; Timothy G Barraclough; Mark W Chase; Pamela S Soltis; Douglas E Soltis; Vincent Savolainen
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Review 10.  Gene duplication: the genomic trade in spare parts.

Authors:  Matthew Hurles
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  121 in total

1.  The unified ICE-CBF pathway provides a transcriptional feedback control of freezing tolerance during cold acclimation in Arabidopsis.

Authors:  Ye Seul Kim; Minyoung Lee; Jae-Hyung Lee; Hyo-Jun Lee; Chung-Mo Park
Journal:  Plant Mol Biol       Date:  2015-08-27       Impact factor: 4.076

2.  Genome-wide identification and characterization of aquaporin gene family in common bean (Phaseolus vulgaris L.).

Authors:  Andrea Ariani; Paul Gepts
Journal:  Mol Genet Genomics       Date:  2015-04-07       Impact factor: 3.291

3.  Evolution and roles of cytokinin genes in angiosperms 1: Do ancient IPTs play housekeeping while non-ancient IPTs play regulatory roles?

Authors:  Xiaojing Wang; Shanshan Lin; Decai Liu; Lijun Gan; Richard McAvoy; Jing Ding; Yi Li
Journal:  Hortic Res       Date:  2020-03-01       Impact factor: 6.793

4.  Genomewide analysis of NBS-encoding genes in kiwi fruit (Actinidia chinensis).

Authors:  Yingjun Li; Yan Zhong; Kaihui Huang; Zong-Ming Cheng
Journal:  J Genet       Date:  2016-12       Impact factor: 1.166

5.  Molecular characterization and overexpression analyses of secologanin synthase to understand the regulation of camptothecin biosynthesis in Nothapodytes nimmoniana (Graham.) Mabb.

Authors:  Gulzar A Rather; Arti Sharma; Prashant Misra; Amit Kumar; Veenu Kaul; Surrinder K Lattoo
Journal:  Protoplasma       Date:  2019-11-08       Impact factor: 3.356

Review 6.  Genetics of dioecy and causal sex chromosomes in plants.

Authors:  Sushil Kumar; Renu Kumari; Vishakha Sharma
Journal:  J Genet       Date:  2014-04       Impact factor: 1.166

7.  Genome-wide identification of salinity responsive HSP70s in common bean.

Authors:  İlker Büyük; Behcet Inal; Emre Ilhan; Mehmet Tanriseven; Sümer Aras; Mustafa Erayman
Journal:  Mol Biol Rep       Date:  2016-08-24       Impact factor: 2.316

8.  Methods to Identify and Study the Evolution of Pseudogenes Using a Phylogenetic Approach.

Authors:  Jacques Dainat; Pierre Pontarotti
Journal:  Methods Mol Biol       Date:  2021

9.  Phosphoglycerate kinase: structural aspects and functions, with special emphasis on the enzyme from Kinetoplastea.

Authors:  Maura Rojas-Pirela; Diego Andrade-Alviárez; Verónica Rojas; Ulrike Kemmerling; Ana J Cáceres; Paul A Michels; Juan Luis Concepción; Wilfredo Quiñones
Journal:  Open Biol       Date:  2020-11-25       Impact factor: 6.411

10.  Resolving misalignment interference for NGS-based clinical diagnostics.

Authors:  Che-Yu Lee; Hai-Yun Yen; Alan W Zhong; Hanlin Gao
Journal:  Hum Genet       Date:  2020-09-11       Impact factor: 4.132

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