Literature DB >> 23636097

Microfluidic cell sorter for use in developing red fluorescent proteins with improved photostability.

Lloyd M Davis1, Jennifer L Lubbeck, Kevin M Dean, Amy E Palmer, Ralph Jimenez.   

Abstract

This paper presents a novel microfluidic cytometer for mammalian cells that rapidly measures the irreversible photobleaching of red fluorescent proteins expressed within each cell and achieves high purity (>99%) selection of individual cells based on these measurements. The selection is achieved by using sub-millisecond timed control of a piezo-tilt mirror to steer a focused 1064-nm laser spot for optical gradient force switching following analysis of the fluorescence signals from passage of the cell through a series of 532-nm laser beams. In transit through each beam, the fluorescent proteins within the cell undergo conversion to dark states, but the microfluidic chip enables the cell to pass sufficiently slowly that recovery from reversible dark states occurs between beams, thereby enabling irreversible photobleaching to be quantified separately from the reversible dark-state conversion. The microfluidic platform achieves sorting of samples down to sub-millilitre volumes with minimal loss, wherein collected cells remain alive and can subsequently proliferate. The instrument provides a unique first tool for rapid selection of individual mammalian cells on the merits of photostability and is likely to form the basis of subsequent lab-on-a-chip platforms that combine photobleaching with other spectroscopic measurements for on-going research to develop advanced red fluorescent proteins by screening of genetic libraries.

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Year:  2013        PMID: 23636097      PMCID: PMC4047792          DOI: 10.1039/c3lc50191d

Source DB:  PubMed          Journal:  Lab Chip        ISSN: 1473-0189            Impact factor:   6.799


  20 in total

1.  Autofluorescent proteins in single-molecule research: applications to live cell imaging microscopy.

Authors:  G S Harms; L Cognet; P H Lommerse; G A Blab; T Schmidt
Journal:  Biophys J       Date:  2001-05       Impact factor: 4.033

2.  Microfluidic sorting of mammalian cells by optical force switching.

Authors:  Mark M Wang; Eugene Tu; Daniel E Raymond; Joon Mo Yang; Haichuan Zhang; Norbert Hagen; Bob Dees; Elinore M Mercer; Anita H Forster; Ilona Kariv; Philippe J Marchand; William F Butler
Journal:  Nat Biotechnol       Date:  2004-12-19       Impact factor: 54.908

3.  Major signal increase in fluorescence microscopy through dark-state relaxation.

Authors:  Gerald Donnert; Christian Eggeling; Stefan W Hell
Journal:  Nat Methods       Date:  2006-12-10       Impact factor: 28.547

4.  Optical trapping, manipulation, and sorting of cells and colloids in microfluidic systems with diode laser bars.

Authors:  Robert Applegate; Jeff Squier; Tor Vestad; John Oakey; David Marr
Journal:  Opt Express       Date:  2004-09-20       Impact factor: 3.894

5.  Microfluidic-based cell sorting of Francisella tularensis infected macrophages using optical forces.

Authors:  Thomas D Perroud; Julia N Kaiser; Jay C Sy; Todd W Lane; Catherine S Branda; Anup K Singh; Kamlesh D Patel
Journal:  Anal Chem       Date:  2008-05-30       Impact factor: 6.986

6.  Surface acoustic wave actuated cell sorting (SAWACS).

Authors:  T Franke; S Braunmüller; L Schmid; A Wixforth; D A Weitz
Journal:  Lab Chip       Date:  2010-01-12       Impact factor: 6.799

7.  Analysis of red-fluorescent proteins provides insight into dark-state conversion and photodegradation.

Authors:  Kevin M Dean; Jennifer L Lubbeck; Jennifer K Binder; Linda R Schwall; Ralph Jimenez; Amy E Palmer
Journal:  Biophys J       Date:  2011-08-17       Impact factor: 4.033

8.  Enhanced cell sorting and manipulation with combined optical tweezer and microfluidic chip technologies.

Authors:  Xiaolin Wang; Shuxun Chen; Marco Kong; Zuankai Wang; Kevin D Costa; Ronald A Li; Dong Sun
Journal:  Lab Chip       Date:  2011-09-14       Impact factor: 6.799

9.  A microfabricated fluorescence-activated cell sorter.

Authors:  A Y Fu; C Spence; A Scherer; F H Arnold; S R Quake
Journal:  Nat Biotechnol       Date:  1999-11       Impact factor: 54.908

10.  Human mammalian cell sorting using a highly integrated micro-fabricated fluorescence-activated cell sorter (microFACS).

Authors:  Sung Hwan Cho; Chun H Chen; Frank S Tsai; Jessica M Godin; Yu-Hwa Lo
Journal:  Lab Chip       Date:  2010-04-09       Impact factor: 6.799

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  10 in total

Review 1.  Rare cell isolation and analysis in microfluidics.

Authors:  Yuchao Chen; Peng Li; Po-Hsun Huang; Yuliang Xie; John D Mai; Lin Wang; Nam-Trung Nguyen; Tony Jun Huang
Journal:  Lab Chip       Date:  2014-02-21       Impact factor: 6.799

2.  High-speed multiparameter photophysical analyses of fluorophore libraries.

Authors:  Kevin M Dean; Lloyd M Davis; Jennifer L Lubbeck; Premashis Manna; Pia Friis; Amy E Palmer; Ralph Jimenez
Journal:  Anal Chem       Date:  2015-04-29       Impact factor: 6.986

3.  Directed evolution of excited state lifetime and brightness in FusionRed using a microfluidic sorter.

Authors:  Premashis Manna; Sheng-Ting Hung; Srijit Mukherjee; Pia Friis; David M Simpson; Maria N Lo; Amy E Palmer; Ralph Jimenez
Journal:  Integr Biol (Camb)       Date:  2018-09-17       Impact factor: 2.192

4.  Microfluidics-based selection of red-fluorescent proteins with decreased rates of photobleaching.

Authors:  Kevin M Dean; Jennifer L Lubbeck; Lloyd M Davis; Chola K Regmi; Prem P Chapagain; Bernard S Gerstman; Ralph Jimenez; Amy E Palmer
Journal:  Integr Biol (Camb)       Date:  2015-02       Impact factor: 2.192

Review 5.  Advances in fluorescence labeling strategies for dynamic cellular imaging.

Authors:  Kevin M Dean; Amy E Palmer
Journal:  Nat Chem Biol       Date:  2014-07       Impact factor: 15.040

Review 6.  Optical sensors to gain mechanistic insights into signaling assemblies.

Authors:  Brian Tenner; Sohum Mehta; Jin Zhang
Journal:  Curr Opin Struct Biol       Date:  2016-09-06       Impact factor: 6.809

7.  Droplet Microfluidic Flow Cytometer For Sorting On Transient Cellular Responses Of Genetically-Encoded Sensors.

Authors:  Brett L Fiedler; Steven Van Buskirk; Kyle P Carter; Yan Qin; Margaret C Carpenter; Amy E Palmer; Ralph Jimenez
Journal:  Anal Chem       Date:  2016-12-13       Impact factor: 6.986

8.  Enhancing fluorescent protein photostability through robot-assisted photobleaching.

Authors:  M D Wiens; F Hoffmann; Y Chen; R E Campbell
Journal:  Integr Biol (Camb)       Date:  2018-07-16       Impact factor: 2.192

9.  High-throughput, image-based screening of pooled genetic-variant libraries.

Authors:  George Emanuel; Jeffrey R Moffitt; Xiaowei Zhuang
Journal:  Nat Methods       Date:  2017-10-30       Impact factor: 28.547

10.  Rapid directed molecular evolution of fluorescent proteins in mammalian cells.

Authors:  Siranush Babakhanova; Erica E Jung; Kazuhiko Namikawa; Hanbin Zhang; Yangdong Wang; Oksana M Subach; Dmitry A Korzhenevskiy; Tatiana V Rakitina; Xian Xiao; Wenjing Wang; Jing Shi; Mikhail Drobizhev; Demian Park; Lea Eisenhard; Hongyun Tang; Reinhard W Köster; Fedor V Subach; Edward S Boyden; Kiryl D Piatkevich
Journal:  Protein Sci       Date:  2021-12-30       Impact factor: 6.725

  10 in total

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