Literature DB >> 23635282

A support vector machine classifier reduces interscanner variation in the HRCT classification of regional disease pattern in diffuse lung disease: comparison to a Bayesian classifier.

Yongjun Chang1, Jonghyuck Lim, Namkug Kim, Joon Beom Seo, David A Lynch.   

Abstract

PURPOSE: To investigate the effect of using different computed tomography (CT) scanners on the accuracy of high-resolution CT (HRCT) images in classifying regional disease patterns in patients with diffuse lung disease, support vector machine (SVM) and Bayesian classifiers were applied to multicenter data.
METHODS: Two experienced radiologists marked sets of 600 rectangular 20 × 20 pixel regions of interest (ROIs) on HRCT images obtained from two scanners (GE and Siemens), including 100 ROIs for each of local patterns of lungs-normal lung and five of regional pulmonary disease patterns (ground-glass opacity, reticular opacity, honeycombing, emphysema, and consolidation). Each ROI was assessed using 22 quantitative features belonging to one of the following descriptors: histogram, gradient, run-length, gray level co-occurrence matrix, low-attenuation area cluster, and top-hat transform. For automatic classification, a Bayesian classifier and a SVM classifier were compared under three different conditions. First, classification accuracies were estimated using data from each scanner. Next, data from the GE and Siemens scanners were used for training and testing, respectively, and vice versa. Finally, all ROI data were integrated regardless of the scanner type and were then trained and tested together. All experiments were performed based on forward feature selection and fivefold cross-validation with 20 repetitions.
RESULTS: For each scanner, better classification accuracies were achieved with the SVM classifier than the Bayesian classifier (92% and 82%, respectively, for the GE scanner; and 92% and 86%, respectively, for the Siemens scanner). The classification accuracies were 82%/72% for training with GE data and testing with Siemens data, and 79%/72% for the reverse. The use of training and test data obtained from the HRCT images of different scanners lowered the classification accuracy compared to the use of HRCT images from the same scanner. For integrated ROI data obtained from both scanners, the classification accuracies with the SVM and Bayesian classifiers were 92% and 77%, respectively. The selected features resulting from the classification process differed by scanner, with more features included for the classification of the integrated HRCT data than for the classification of the HRCT data from each scanner. For the integrated data, consisting of HRCT images of both scanners, the classification accuracy based on the SVM was statistically similar to the accuracy of the data obtained from each scanner. However, the classification accuracy of the integrated data using the Bayesian classifier was significantly lower than the classification accuracy of the ROI data of each scanner.
CONCLUSIONS: The use of an integrated dataset along with a SVM classifier rather than a Bayesian classifier has benefits in terms of the classification accuracy of HRCT images acquired with more than one scanner. This finding is of relevance in studies involving large number of images, as is the case in a multicenter trial with different scanners.

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Mesh:

Year:  2013        PMID: 23635282     DOI: 10.1118/1.4802214

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  7 in total

1.  An Ensemble Method for Classifying Regional Disease Patterns of Diffuse Interstitial Lung Disease Using HRCT Images from Different Vendors.

Authors:  Sanghoon Jun; Namkug Kim; Joon Beom Seo; Young Kyung Lee; David A Lynch
Journal:  J Digit Imaging       Date:  2017-12       Impact factor: 4.056

2.  Hybrid Airway Segmentation Using Multi-Scale Tubular Structure Filters and Texture Analysis on 3D Chest CT Scans.

Authors:  Minho Lee; June-Goo Lee; Namkug Kim; Joon Beom Seo; Sang Min Lee
Journal:  J Digit Imaging       Date:  2019-10       Impact factor: 4.056

3.  Prediction of survival by texture-based automated quantitative assessment of regional disease patterns on CT in idiopathic pulmonary fibrosis.

Authors:  Sang Min Lee; Joon Beom Seo; Sang Young Oh; Tae Hoon Kim; Jin Woo Song; Sang Min Lee; Namkug Kim
Journal:  Eur Radiol       Date:  2017-09-19       Impact factor: 5.315

4.  Comparison of Shallow and Deep Learning Methods on Classifying the Regional Pattern of Diffuse Lung Disease.

Authors:  Guk Bae Kim; Kyu-Hwan Jung; Yeha Lee; Hyun-Jun Kim; Namkug Kim; Sanghoon Jun; Joon Beom Seo; David A Lynch
Journal:  J Digit Imaging       Date:  2018-08       Impact factor: 4.056

5.  Perfusion- and pattern-based quantitative CT indexes using contrast-enhanced dual-energy computed tomography in diffuse interstitial lung disease: relationships with physiologic impairment and prediction of prognosis.

Authors:  Jung Won Moon; Jang Pyo Bae; Ho Yun Lee; Namkug Kim; Man Pyo Chung; Hye Yun Park; Yongjun Chang; Joon Beom Seo; Kyung Soo Lee
Journal:  Eur Radiol       Date:  2015-08-09       Impact factor: 5.315

6.  Development of a Computer-Aided Differential Diagnosis System to Distinguish Between Usual Interstitial Pneumonia and Non-specific Interstitial Pneumonia Using Texture- and Shape-Based Hierarchical Classifiers on HRCT Images.

Authors:  SangHoon Jun; BeomHee Park; Joon Beom Seo; SangMin Lee; Namkug Kim
Journal:  J Digit Imaging       Date:  2018-04       Impact factor: 4.056

7.  Effective attention-based network for syndrome differentiation of AIDS.

Authors:  Huaxin Pang; Shikui Wei; Yufeng Zhao; Liyun He; Jian Wang; Baoyan Liu; Yao Zhao
Journal:  BMC Med Inform Decis Mak       Date:  2020-10-15       Impact factor: 2.796

  7 in total

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