| Literature DB >> 23634139 |
Shaaban K Mohamed1, Mehmet Akkurt, Antar A Abdelhamid, Aamer Saeed, Ulrich Flörke.
Abstract
In the xanthene ring system in the title compound, C19H18O4, the 4H-pyran ring has a maximum deviation of 0.110 (2) Å from planarity and the cyclo-hexene ring exhibits a puckered conformation [puckering parameters Q T = 0.452 (3) Å, θ = 57.0 (4) and ϕ = 131.7 (4)°]. The cyclo-hexene ring attached to the xanthene system adopts an envelope conformation, with the middle of the three methylene C atoms as the flap atom. In the crystal, O-H⋯O and C-H⋯O hydrogen bonds form infinite chains of R 1 (2)(6) ring motifs along [100] with the xanthene groups arranged in an alternating zigzag manner.Entities:
Year: 2013 PMID: 23634139 PMCID: PMC3629652 DOI: 10.1107/S1600536813007952
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H18O4 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2n | Cell parameters from 3393 reflections |
| θ = 2.9–27.9° | |
| µ = 0.09 mm−1 | |
| Prism, pale-yellow | |
| 0.37 × 0.24 × 0.15 mm |
| Bruker SMART APEX diffractometer | 1901 independent reflections |
| Radiation source: sealed tube | 1799 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 27.9°, θmin = 2.9° |
| Absorption correction: multi-scan ( | |
| 13880 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| H-atom parameters constrained | |
| 1901 reflections | (Δ/σ)max < 0.001 |
| 209 parameters | Δρmax = 0.39 e Å−3 |
| 1 restraint | Δρmin = −0.18 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement on |
| O1 | 0.28192 (10) | 0.69820 (18) | 0.43470 (13) | 0.0184 (4) | |
| O2 | −0.06046 (11) | 0.61746 (18) | 0.43776 (14) | 0.0212 (4) | |
| O3 | 0.32497 (11) | 0.31450 (18) | 0.43000 (13) | 0.0201 (4) | |
| O4 | 0.06177 (15) | 0.4417 (3) | 0.63635 (14) | 0.0332 (6) | |
| C1 | 0.11167 (14) | 0.6473 (2) | 0.44797 (16) | 0.0146 (5) | |
| C2 | 0.19662 (15) | 0.7556 (2) | 0.44266 (16) | 0.0148 (5) | |
| C3 | 0.18243 (15) | 0.9436 (2) | 0.4447 (2) | 0.0213 (6) | |
| C4 | 0.08584 (18) | 0.9945 (3) | 0.4923 (2) | 0.0287 (7) | |
| C5 | −0.00064 (16) | 0.9004 (3) | 0.4487 (2) | 0.0282 (7) | |
| C6 | 0.01837 (15) | 0.7154 (2) | 0.44477 (17) | 0.0170 (5) | |
| C7 | 0.12663 (14) | 0.4583 (2) | 0.44760 (16) | 0.0143 (5) | |
| C8 | 0.16996 (17) | 0.3960 (3) | 0.35574 (16) | 0.0169 (6) | |
| C9 | 0.1140 (2) | 0.4019 (3) | 0.27230 (18) | 0.0245 (7) | |
| C10 | 0.1531 (2) | 0.3453 (3) | 0.18896 (19) | 0.0309 (8) | |
| C11 | 0.2489 (3) | 0.2819 (3) | 0.18615 (19) | 0.0337 (8) | |
| C12 | 0.3059 (2) | 0.2744 (3) | 0.26740 (19) | 0.0273 (7) | |
| C13 | 0.26539 (18) | 0.3314 (3) | 0.35123 (17) | 0.0189 (6) | |
| C14 | 0.28205 (18) | 0.3342 (3) | 0.51564 (16) | 0.0175 (6) | |
| C15 | 0.35058 (18) | 0.2726 (3) | 0.59122 (19) | 0.0247 (7) | |
| C16 | 0.3183 (2) | 0.3350 (3) | 0.6870 (2) | 0.0312 (8) | |
| C17 | 0.2073 (2) | 0.3126 (4) | 0.70056 (19) | 0.0329 (9) | |
| C18 | 0.14584 (19) | 0.3913 (3) | 0.62272 (17) | 0.0226 (6) | |
| C19 | 0.18972 (17) | 0.3968 (3) | 0.52852 (15) | 0.0159 (6) | |
| H2 | −0.11220 | 0.67370 | 0.44770 | 0.0320* | |
| H3A | 0.18270 | 0.98680 | 0.37960 | 0.0260* | |
| H3B | 0.23900 | 0.99530 | 0.47850 | 0.0260* | |
| H4A | 0.08960 | 0.96920 | 0.56020 | 0.0340* | |
| H4B | 0.07550 | 1.11630 | 0.48490 | 0.0340* | |
| H5A | −0.06160 | 0.92160 | 0.48590 | 0.0340* | |
| H5B | −0.01220 | 0.94270 | 0.38430 | 0.0340* | |
| H7A | 0.05940 | 0.40600 | 0.45460 | 0.0170* | |
| H9A | 0.04840 | 0.44570 | 0.27360 | 0.0290* | |
| H10A | 0.11430 | 0.34970 | 0.13320 | 0.0370* | |
| H11A | 0.27580 | 0.24340 | 0.12840 | 0.0400* | |
| H12A | 0.37160 | 0.23090 | 0.26570 | 0.0330* | |
| H15A | 0.41910 | 0.31150 | 0.57810 | 0.0300* | |
| H15B | 0.35100 | 0.14880 | 0.59120 | 0.0300* | |
| H16A | 0.35440 | 0.27270 | 0.73640 | 0.0370* | |
| H16B | 0.33550 | 0.45480 | 0.69320 | 0.0370* | |
| H17A | 0.18780 | 0.36300 | 0.76130 | 0.0390* | |
| H17B | 0.19210 | 0.19170 | 0.70360 | 0.0390* |
| O1 | 0.0111 (6) | 0.0182 (6) | 0.0260 (8) | −0.0017 (5) | 0.0003 (7) | 0.0003 (7) |
| O2 | 0.0101 (7) | 0.0176 (7) | 0.0358 (9) | 0.0000 (5) | −0.0006 (8) | −0.0019 (8) |
| O3 | 0.0144 (7) | 0.0194 (7) | 0.0265 (9) | 0.0032 (5) | 0.0007 (7) | 0.0003 (7) |
| O4 | 0.0272 (10) | 0.0447 (11) | 0.0278 (10) | 0.0020 (8) | 0.0065 (8) | −0.0008 (8) |
| C1 | 0.0129 (9) | 0.0127 (8) | 0.0181 (10) | −0.0003 (7) | −0.0004 (8) | −0.0004 (8) |
| C2 | 0.0138 (9) | 0.0145 (8) | 0.0160 (9) | −0.0005 (7) | −0.0019 (8) | 0.0003 (9) |
| C3 | 0.0165 (9) | 0.0131 (8) | 0.0343 (12) | −0.0026 (7) | 0.0002 (10) | 0.0005 (10) |
| C4 | 0.0197 (11) | 0.0170 (10) | 0.0493 (16) | −0.0001 (9) | 0.0003 (11) | −0.0086 (11) |
| C5 | 0.0158 (10) | 0.0142 (9) | 0.0547 (17) | 0.0031 (7) | −0.0026 (12) | −0.0034 (12) |
| C6 | 0.0153 (9) | 0.0142 (8) | 0.0214 (10) | 0.0000 (7) | −0.0018 (9) | −0.0018 (9) |
| C7 | 0.0119 (8) | 0.0119 (7) | 0.0192 (10) | −0.0011 (7) | −0.0014 (8) | 0.0009 (8) |
| C8 | 0.0220 (11) | 0.0110 (10) | 0.0177 (10) | −0.0013 (8) | −0.0006 (9) | −0.0005 (8) |
| C9 | 0.0336 (13) | 0.0180 (11) | 0.0218 (11) | −0.0016 (10) | −0.0075 (10) | 0.0001 (9) |
| C10 | 0.0510 (17) | 0.0207 (11) | 0.0210 (12) | −0.0021 (11) | −0.0086 (12) | −0.0012 (10) |
| C11 | 0.0585 (19) | 0.0233 (12) | 0.0192 (12) | 0.0008 (12) | 0.0094 (12) | −0.0019 (10) |
| C12 | 0.0342 (14) | 0.0179 (11) | 0.0297 (13) | 0.0035 (10) | 0.0118 (11) | 0.0002 (10) |
| C13 | 0.0235 (11) | 0.0133 (10) | 0.0198 (10) | −0.0012 (8) | 0.0033 (9) | 0.0005 (8) |
| C14 | 0.0198 (10) | 0.0121 (9) | 0.0207 (11) | −0.0017 (8) | −0.0039 (9) | 0.0018 (8) |
| C15 | 0.0230 (12) | 0.0209 (11) | 0.0303 (13) | 0.0016 (9) | −0.0069 (10) | 0.0052 (10) |
| C16 | 0.0371 (15) | 0.0303 (13) | 0.0262 (13) | 0.0039 (11) | −0.0113 (11) | 0.0021 (11) |
| C17 | 0.0446 (17) | 0.0358 (15) | 0.0184 (12) | −0.0025 (12) | −0.0003 (11) | 0.0070 (11) |
| C18 | 0.0266 (12) | 0.0210 (10) | 0.0201 (11) | −0.0048 (9) | 0.0027 (10) | −0.0017 (9) |
| C19 | 0.0198 (10) | 0.0119 (9) | 0.0159 (10) | −0.0019 (8) | −0.0016 (8) | 0.0013 (8) |
| O1—C2 | 1.240 (2) | C14—C15 | 1.500 (3) |
| O2—C6 | 1.322 (2) | C15—C16 | 1.516 (4) |
| O3—C13 | 1.385 (3) | C16—C17 | 1.515 (4) |
| O3—C14 | 1.358 (3) | C17—C18 | 1.519 (4) |
| O4—C18 | 1.216 (3) | C18—C19 | 1.466 (3) |
| O2—H2 | 0.8400 | C3—H3A | 0.9900 |
| C1—C6 | 1.368 (3) | C3—H3B | 0.9900 |
| C1—C7 | 1.526 (2) | C4—H4A | 0.9900 |
| C1—C2 | 1.436 (3) | C4—H4B | 0.9900 |
| C2—C3 | 1.517 (2) | C5—H5A | 0.9900 |
| C3—C4 | 1.520 (3) | C5—H5B | 0.9900 |
| C4—C5 | 1.518 (3) | C7—H7A | 1.0000 |
| C5—C6 | 1.503 (3) | C9—H9A | 0.9500 |
| C7—C19 | 1.513 (3) | C10—H10A | 0.9500 |
| C7—C8 | 1.516 (3) | C11—H11A | 0.9500 |
| C8—C9 | 1.407 (3) | C12—H12A | 0.9500 |
| C8—C13 | 1.385 (3) | C15—H15A | 0.9900 |
| C9—C10 | 1.375 (4) | C15—H15B | 0.9900 |
| C10—C11 | 1.385 (5) | C16—H16A | 0.9900 |
| C11—C12 | 1.389 (4) | C16—H16B | 0.9900 |
| C12—C13 | 1.389 (4) | C17—H17A | 0.9900 |
| C14—C19 | 1.351 (3) | C17—H17B | 0.9900 |
| C13—O3—C14 | 118.06 (18) | C2—C3—H3B | 109.00 |
| C6—O2—H2 | 109.00 | C4—C3—H3A | 109.00 |
| C2—C1—C7 | 119.56 (16) | C4—C3—H3B | 109.00 |
| C6—C1—C7 | 121.03 (16) | H3A—C3—H3B | 108.00 |
| C2—C1—C6 | 119.14 (15) | C3—C4—H4A | 110.00 |
| O1—C2—C3 | 119.03 (17) | C3—C4—H4B | 110.00 |
| C1—C2—C3 | 119.85 (17) | C5—C4—H4A | 110.00 |
| O1—C2—C1 | 121.11 (15) | C5—C4—H4B | 110.00 |
| C2—C3—C4 | 112.44 (17) | H4A—C4—H4B | 108.00 |
| C3—C4—C5 | 109.8 (2) | C4—C5—H5A | 109.00 |
| C4—C5—C6 | 111.93 (19) | C4—C5—H5B | 109.00 |
| O2—C6—C5 | 116.77 (17) | C6—C5—H5A | 109.00 |
| C1—C6—C5 | 123.15 (17) | C6—C5—H5B | 109.00 |
| O2—C6—C1 | 120.08 (15) | H5A—C5—H5B | 108.00 |
| C1—C7—C19 | 113.18 (17) | C1—C7—H7A | 107.00 |
| C8—C7—C19 | 109.57 (17) | C8—C7—H7A | 107.00 |
| C1—C7—C8 | 112.30 (18) | C19—C7—H7A | 107.00 |
| C7—C8—C13 | 121.2 (2) | C8—C9—H9A | 120.00 |
| C9—C8—C13 | 118.0 (2) | C10—C9—H9A | 120.00 |
| C7—C8—C9 | 120.8 (2) | C9—C10—H10A | 120.00 |
| C8—C9—C10 | 120.9 (2) | C11—C10—H10A | 120.00 |
| C9—C10—C11 | 120.1 (3) | C10—C11—H11A | 120.00 |
| C10—C11—C12 | 120.3 (3) | C12—C11—H11A | 120.00 |
| C11—C12—C13 | 119.0 (3) | C11—C12—H12A | 121.00 |
| O3—C13—C12 | 115.9 (2) | C13—C12—H12A | 120.00 |
| C8—C13—C12 | 121.7 (2) | C14—C15—H15A | 109.00 |
| O3—C13—C8 | 122.3 (2) | C14—C15—H15B | 109.00 |
| O3—C14—C15 | 110.2 (2) | C16—C15—H15A | 109.00 |
| O3—C14—C19 | 123.7 (2) | C16—C15—H15B | 109.00 |
| C15—C14—C19 | 126.1 (2) | H15A—C15—H15B | 108.00 |
| C14—C15—C16 | 111.2 (2) | C15—C16—H16A | 109.00 |
| C15—C16—C17 | 111.0 (2) | C15—C16—H16B | 109.00 |
| C16—C17—C18 | 113.2 (2) | C17—C16—H16A | 109.00 |
| O4—C18—C19 | 120.7 (2) | C17—C16—H16B | 109.00 |
| C17—C18—C19 | 117.5 (2) | H16A—C16—H16B | 108.00 |
| O4—C18—C17 | 121.8 (2) | C16—C17—H17A | 109.00 |
| C7—C19—C18 | 118.8 (2) | C16—C17—H17B | 109.00 |
| C14—C19—C18 | 118.9 (2) | C18—C17—H17A | 109.00 |
| C7—C19—C14 | 122.2 (2) | C18—C17—H17B | 109.00 |
| C2—C3—H3A | 109.00 | H17A—C17—H17B | 108.00 |
| C14—O3—C13—C8 | 11.8 (3) | C8—C7—C19—C14 | 15.1 (3) |
| C14—O3—C13—C12 | −166.1 (2) | C8—C7—C19—C18 | −159.4 (2) |
| C13—O3—C14—C15 | 166.70 (19) | C7—C8—C9—C10 | −179.9 (2) |
| C13—O3—C14—C19 | −11.8 (3) | C13—C8—C9—C10 | −0.1 (4) |
| C6—C1—C2—O1 | −171.8 (2) | C7—C8—C13—O3 | 2.3 (3) |
| C6—C1—C2—C3 | 6.9 (3) | C7—C8—C13—C12 | −179.8 (2) |
| C7—C1—C2—O1 | 2.4 (3) | C9—C8—C13—O3 | −177.5 (2) |
| C7—C1—C2—C3 | −178.9 (2) | C9—C8—C13—C12 | 0.3 (4) |
| C2—C1—C6—O2 | 171.6 (2) | C8—C9—C10—C11 | −0.2 (4) |
| C2—C1—C6—C5 | −8.3 (4) | C9—C10—C11—C12 | 0.3 (4) |
| C7—C1—C6—O2 | −2.5 (4) | C10—C11—C12—C13 | 0.0 (4) |
| C7—C1—C6—C5 | 177.6 (2) | C11—C12—C13—O3 | 177.7 (2) |
| C2—C1—C7—C8 | −65.0 (3) | C11—C12—C13—C8 | −0.3 (4) |
| C2—C1—C7—C19 | 59.7 (3) | O3—C14—C15—C16 | 164.41 (19) |
| C6—C1—C7—C8 | 109.0 (2) | C19—C14—C15—C16 | −17.2 (3) |
| C6—C1—C7—C19 | −126.3 (2) | O3—C14—C19—C7 | −2.7 (4) |
| O1—C2—C3—C4 | −157.1 (2) | O3—C14—C19—C18 | 171.8 (2) |
| C1—C2—C3—C4 | 24.2 (3) | C15—C14—C19—C7 | 179.1 (2) |
| C2—C3—C4—C5 | −52.2 (3) | C15—C14—C19—C18 | −6.4 (4) |
| C3—C4—C5—C6 | 50.8 (3) | C14—C15—C16—C17 | 46.1 (3) |
| C4—C5—C6—O2 | 158.5 (2) | C15—C16—C17—C18 | −54.0 (3) |
| C4—C5—C6—C1 | −21.6 (3) | C16—C17—C18—O4 | −151.9 (3) |
| C1—C7—C8—C9 | −68.2 (3) | C16—C17—C18—C19 | 31.2 (3) |
| C1—C7—C8—C13 | 111.9 (2) | O4—C18—C19—C7 | −3.0 (4) |
| C19—C7—C8—C9 | 165.1 (2) | O4—C18—C19—C14 | −177.7 (2) |
| C19—C7—C8—C13 | −14.7 (3) | C17—C18—C19—C7 | 173.9 (2) |
| C1—C7—C19—C14 | −111.1 (2) | C17—C18—C19—C14 | −0.8 (3) |
| C1—C7—C19—C18 | 74.5 (3) |
| H··· | ||||
| O2—H2···O1i | 0.84 | 1.76 | 2.582 (2) | 164 |
| C5—H5 | 0.99 | 2.42 | 3.034 (3) | 119 |
| C7—H7 | 1.00 | 2.35 | 2.822 (2) | 108 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O2—H2⋯O1i | 0.84 | 1.76 | 2.582 (2) | 164 |
| C5—H5 | 0.99 | 2.42 | 3.034 (3) | 119 |
Symmetry code: (i) .