Literature DB >> 23633595

Imaging protein three-dimensional nanocrystals with cryo-EM.

Igor Nederlof1, Yao Wang Li, Marin van Heel, Jan Pieter Abrahams.   

Abstract

Flash-cooled three-dimensional crystals of the small protein lysozyme with a thickness of the order of 100 nm were imaged by 300 kV cryo-EM on a Falcon direct electron detector. The images were taken close to focus and to the eye appeared devoid of contrast. Fourier transforms of the images revealed the reciprocal lattice up to 3 Å resolution in favourable cases and up to 4 Å resolution for about half the crystals. The reciprocal-lattice spots showed structure, indicating that the ordering of the crystals was not uniform. Data processing revealed details at higher than 2 Å resolution and indicated the presence of multiple mosaic blocks within the crystal which could be separately processed. The prospects for full three-dimensional structure determination by electron imaging of protein three-dimensional nanocrystals are discussed.

Entities:  

Keywords:  electron microscopy; protein nanocrystals

Mesh:

Substances:

Year:  2013        PMID: 23633595     DOI: 10.1107/S0907444913002734

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  18 in total

1.  Use of transmission electron microscopy to identify nanocrystals of challenging protein targets.

Authors:  Hilary P Stevenson; Alexander M Makhov; Monica Calero; Andrea L Edwards; Oliver B Zeldin; Irimpan I Mathews; Guowu Lin; Christopher O Barnes; Hugo Santamaria; Ted M Ross; S Michael Soltis; Chaitan Khosla; V Nagarajan; James F Conway; Aina E Cohen; Guillermo Calero
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-28       Impact factor: 11.205

2.  Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.

Authors:  Michael R Sawaya; Jose Rodriguez; Duilio Cascio; Michael J Collazo; Dan Shi; Francis E Reyes; Johan Hattne; Tamir Gonen; David S Eisenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-19       Impact factor: 11.205

Review 3.  The cryo-EM method microcrystal electron diffraction (MicroED).

Authors:  Brent L Nannenga; Tamir Gonen
Journal:  Nat Methods       Date:  2019-04-29       Impact factor: 28.547

Review 4.  The hairpin conformation of the amyloid β peptide is an important structural motif along the aggregation pathway.

Authors:  Axel Abelein; Jan Pieter Abrahams; Jens Danielsson; Astrid Gräslund; Jüri Jarvet; Jinghui Luo; Ann Tiiman; Sebastian K T S Wärmländer
Journal:  J Biol Inorg Chem       Date:  2014-04-16       Impact factor: 3.358

Review 5.  MicroED opens a new era for biological structure determination.

Authors:  Brent L Nannenga; Tamir Gonen
Journal:  Curr Opin Struct Biol       Date:  2016-10-01       Impact factor: 6.809

Review 6.  High-Resolution Macromolecular Structure Determination by MicroED, a cryo-EM Method.

Authors:  J A Rodriguez; T Gonen
Journal:  Methods Enzymol       Date:  2016-06-16       Impact factor: 1.600

7.  MicroED data collection and processing.

Authors:  Johan Hattne; Francis E Reyes; Brent L Nannenga; Dan Shi; M Jason de la Cruz; Andrew G W Leslie; Tamir Gonen
Journal:  Acta Crystallogr A Found Adv       Date:  2015-07-01       Impact factor: 2.290

8.  Lattice filter for processing image data of three-dimensional protein nanocrystals.

Authors:  E van Genderen; Y W Li; I Nederlof; J P Abrahams
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-01-01       Impact factor: 7.652

9.  Serial crystallography on in vivo grown microcrystals using synchrotron radiation.

Authors:  Cornelius Gati; Gleb Bourenkov; Marco Klinge; Dirk Rehders; Francesco Stellato; Dominik Oberthür; Oleksandr Yefanov; Benjamin P Sommer; Stefan Mogk; Michael Duszenko; Christian Betzel; Thomas R Schneider; Henry N Chapman; Lars Redecke
Journal:  IUCrJ       Date:  2014-02-10       Impact factor: 4.769

10.  Identifying, studying and making good use of macromolecular crystals.

Authors:  Guillermo Calero; Aina E Cohen; Joseph R Luft; Janet Newman; Edward H Snell
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-07-25       Impact factor: 1.056

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.