Literature DB >> 23604636

Fabrication of 14 different RNA nanoparticles for specific tumor targeting without accumulation in normal organs.

Yi Shu1, Farzin Haque, Dan Shu, Wei Li, Zhenqi Zhu, Malak Kotb, Yuri Lyubchenko, Peixuan Guo.   

Abstract

Due to structural flexibility, RNase sensitivity, and serum instability, RNA nanoparticles with concrete shapes for in vivo application remain challenging to construct. Here we report the construction of 14 RNA nanoparticles with solid shapes for targeting cancers specifically. These RNA nanoparticles were resistant to RNase degradation, stable in serum for >36 h, and stable in vivo after systemic injection. By applying RNA nanotechnology and exemplifying with these 14 RNA nanoparticles, we have established the technology and developed "toolkits" utilizing a variety of principles to construct RNA architectures with diverse shapes and angles. The structure elements of phi29 motor pRNA were utilized for fabrication of dimers, twins, trimers, triplets, tetramers, quadruplets, pentamers, hexamers, heptamers, and other higher-order oligomers, as well as branched diverse architectures via hand-in-hand, foot-to-foot, and arm-on-arm interactions. These novel RNA nanostructures harbor resourceful functionalities for numerous applications in nanotechnology and medicine. It was found that all incorporated functional modules, such as siRNA, ribozymes, aptamers, and other functionalities, folded correctly and functioned independently within the nanoparticles. The incorporation of all functionalities was achieved prior, but not subsequent, to the assembly of the RNA nanoparticles, thus ensuring the production of homogeneous therapeutic nanoparticles. More importantly, upon systemic injection, these RNA nanoparticles targeted cancer exclusively in vivo without accumulation in normal organs and tissues. These findings open a new territory for cancer targeting and treatment. The versatility and diversity in structure and function derived from one biological RNA molecule implies immense potential concealed within the RNA nanotechnology field.

Entities:  

Keywords:  RNA nanoparticle; RNA nanotechnology; RNA therapeutics; bacteriophage phi29; nanobiotechnology; target delivery

Mesh:

Substances:

Year:  2013        PMID: 23604636      PMCID: PMC3683911          DOI: 10.1261/rna.037002.112

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  88 in total

1.  Mechanism of dimerization of bicoid mRNA: initiation and stabilization.

Authors:  Céline Wagner; Chantal Ehresmann; Bernard Ehresmann; Christine Brunel
Journal:  J Biol Chem       Date:  2003-11-07       Impact factor: 5.157

2.  Medicine: silencing viruses with RNA.

Authors:  Gordon G Carmichael
Journal:  Nature       Date:  2002-07-25       Impact factor: 49.962

Review 3.  MicroRNAs: small RNAs with a big role in gene regulation.

Authors:  Lin He; Gregory J Hannon
Journal:  Nat Rev Genet       Date:  2004-07       Impact factor: 53.242

4.  Bottom-up Assembly of RNA Arrays and Superstructures as Potential Parts in Nanotechnology.

Authors:  Dan Shu; Wulf-Dieter Moll; Zhaoxiang Deng; Chengde Mao; Peixuan Guo
Journal:  Nano Lett       Date:  2004-09       Impact factor: 11.189

5.  The origin of mutants.

Authors:  J Cairns; J Overbaugh; S Miller
Journal:  Nature       Date:  1988-09-08       Impact factor: 49.962

6.  Synthetic RNA-protein complex shaped like an equilateral triangle.

Authors:  Hirohisa Ohno; Tetsuhiro Kobayashi; Rinko Kabata; Kei Endo; Takuma Iwasa; Shige H Yoshimura; Kunio Takeyasu; Tan Inoue; Hirohide Saito
Journal:  Nat Nanotechnol       Date:  2011-01-16       Impact factor: 39.213

7.  Construction of folate-conjugated pRNA of bacteriophage phi29 DNA packaging motor for delivery of chimeric siRNA to nasopharyngeal carcinoma cells.

Authors:  S Guo; F Huang; P Guo
Journal:  Gene Ther       Date:  2006-05       Impact factor: 5.250

8.  AFM for analysis of structure and dynamics of DNA and protein-DNA complexes.

Authors:  Yuri L Lyubchenko; Luda S Shlyakhtenko
Journal:  Methods       Date:  2008-10-07       Impact factor: 3.608

9.  Riboswitches in eubacteria sense the second messenger cyclic di-GMP.

Authors:  N Sudarsan; E R Lee; Z Weinberg; R H Moy; J N Kim; K H Link; R R Breaker
Journal:  Science       Date:  2008-07-18       Impact factor: 47.728

Review 10.  Small silencing RNAs: an expanding universe.

Authors:  Megha Ghildiyal; Phillip D Zamore
Journal:  Nat Rev Genet       Date:  2009-02       Impact factor: 53.242

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  67 in total

1.  RNA nanotechnology for computer design and in vivo computation.

Authors:  Meikang Qiu; Emil Khisamutdinov; Zhengyi Zhao; Cheryl Pan; Jeong-Woo Choi; Neocles B Leontis; Peixuan Guo
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2013-09-02       Impact factor: 4.226

2.  RNAi-microsponges form through self-assembly of the organic and inorganic products of transcription.

Authors:  Kevin E Shopsowitz; Young Hoon Roh; Zhou J Deng; Stephen W Morton; Paula T Hammond
Journal:  Small       Date:  2014-04-24       Impact factor: 13.281

3.  Hydrophobic Effect from Conjugated Chemicals or Drugs on In Vivo Biodistribution of RNA Nanoparticles.

Authors:  Daniel L Jasinski; Hongran Yin; Zhefeng Li; Peixuan Guo
Journal:  Hum Gene Ther       Date:  2017-10-12       Impact factor: 5.695

4.  The Use of Minimal RNA Toeholds to Trigger the Activation of Multiple Functionalities.

Authors:  Kirill A Afonin; Mathias Viard; Philip Tedbury; Eckart Bindewald; Lorena Parlea; Marshall Howington; Melissa Valdman; Alizah Johns-Boehme; Cara Brainerd; Eric O Freed; Bruce A Shapiro
Journal:  Nano Lett       Date:  2016-02-29       Impact factor: 11.189

5.  Programmable Nucleic Acid Based Polygons with Controlled Neuroimmunomodulatory Properties for Predictive QSAR Modeling.

Authors:  Morgan Brittany Johnson; Justin R Halman; Emily Satterwhite; Alexey V Zakharov; My N Bui; Kheiria Benkato; Victoria Goldsworthy; Taejin Kim; Enping Hong; Marina A Dobrovolskaia; Emil F Khisamutdinov; Ian Marriott; Kirill A Afonin
Journal:  Small       Date:  2017-09-18       Impact factor: 13.281

Review 6.  Methods for construction and characterization of simple or special multifunctional RNA nanoparticles based on the 3WJ of phi29 DNA packaging motor.

Authors:  Sijin Guo; Xijun Piao; Hui Li; Peixuan Guo
Journal:  Methods       Date:  2018-03-09       Impact factor: 3.608

7.  The Effect of Size and Shape of RNA Nanoparticles on Biodistribution.

Authors:  Daniel L Jasinski; Hui Li; Peixuan Guo
Journal:  Mol Ther       Date:  2017-12-22       Impact factor: 11.454

8.  Functional assays for specific targeting and delivery of RNA nanoparticles to brain tumor.

Authors:  Tae Jin Lee; Farzin Haque; Mario Vieweger; Ji Young Yoo; Balveen Kaur; Peixuan Guo; Carlo M Croce
Journal:  Methods Mol Biol       Date:  2015

Review 9.  Manipulating the in vivo immune response by targeted gene knockdown.

Authors:  Judy Lieberman
Journal:  Curr Opin Immunol       Date:  2015-07-03       Impact factor: 7.486

Review 10.  Ultrastable pRNA hexameric ring gearing hexameric phi29 DNA-packaging motor by revolving without rotating and coiling.

Authors:  Chad Schwartz; Peixuan Guo
Journal:  Curr Opin Biotechnol       Date:  2013-05-14       Impact factor: 9.740

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