Literature DB >> 2357914

A 41-42 bp tandemly repeated sequence isolated from nuclear envelopes of chicken erythrocytes is located predominantly on microchromosomes.

M A Matzke1, F Varga, H Berger, J Schernthaner, D Schweizer, B Mayr, A J Matzke.   

Abstract

To study whether specific DNA sequences are associated with nuclear membranes, residual DNA was extracted from DNase-treated nuclear envelopes prepared from erythrocytes of adult chickens (Gallus domesticus). This DNA was then blunt-end ligated into a bacterial plasmid vector. DNA blot analysis and nucleotide sequence determination revealed that approximately 30% of the cloned fragments consisted of different multiples of a 41-42 bp tandemly repeated, partially symmetrical sequence. In situ hybridization to chicken chromosomes demonstrated that the sequence was located primarily on microchromosomes, although some hybridization was also observed to macrochromosomes 7 and 8. Digestion of chicken DNA with any of a number of restriction enzymes did not completely reduce the intensity of a high molecular weight band to which the repeated sequence hybridized. These results, along with those obtained from in situ hybridization, suggested that many copies of this sequence are organized into large tandem arrays, and are not dispersed in many shorter repetitive blocks throughout the chicken genome. Although the repetitive sequence constituted approximately 10% of the chicken genome, it did not hybridize to quail or turkey DNA.

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Year:  1990        PMID: 2357914     DOI: 10.1007/bf01735329

Source DB:  PubMed          Journal:  Chromosoma        ISSN: 0009-5915            Impact factor:   4.316


  28 in total

1.  Identification of a mammalian protein that binds specifically to DNA containing methylated CpGs.

Authors:  R R Meehan; J D Lewis; S McKay; E L Kleiner; A P Bird
Journal:  Cell       Date:  1989-08-11       Impact factor: 41.582

Review 2.  Structure and function of nuclear membranes.

Authors:  W W Franke
Journal:  Biochem Soc Symp       Date:  1977

3.  Isolation and properties of the nuclear envelope.

Authors:  C B Kasper
Journal:  Methods Enzymol       Date:  1974       Impact factor: 1.600

4.  Nuclear membranes from mammalian liver. IV. Characterization of membrane-attached DNA.

Authors:  W W Franke; B Deumling; H Zentgraf; H Falk; P M Rae
Journal:  Exp Cell Res       Date:  1973-10       Impact factor: 3.905

Review 5.  The nucleus: structure, function, and dynamics.

Authors:  J W Newport; D J Forbes
Journal:  Annu Rev Biochem       Date:  1987       Impact factor: 23.643

6.  Organization of the higher-order chromatin loop: specific DNA attachment sites on nuclear scaffold.

Authors:  J Mirkovitch; M E Mirault; U K Laemmli
Journal:  Cell       Date:  1984-11       Impact factor: 41.582

7.  An extended chicken karyotype, including the NOR chromosome.

Authors:  H Auer; B Mayr; M Lambrou; W Schleger
Journal:  Cytogenet Cell Genet       Date:  1987

Review 8.  The nucleoskeleton: artefact, passive framework or active site?

Authors:  P R Cook
Journal:  J Cell Sci       Date:  1988-05       Impact factor: 5.285

Review 9.  The nuclear envelope and the architecture of the nuclear periphery.

Authors:  W W Franke; U Scheer; G Krohne; E D Jarasch
Journal:  J Cell Biol       Date:  1981-12       Impact factor: 10.539

10.  Fractionation of the nucleus by divalent cations. Isolation of nuclear membranes.

Authors:  A Monneron; G Blobel; G E Palade
Journal:  J Cell Biol       Date:  1972-10       Impact factor: 10.539

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  33 in total

Review 1.  B-chromosome evolution.

Authors:  J P Camacho; T F Sharbel; L W Beukeboom
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2000-02-29       Impact factor: 6.237

2.  Partially inverted tandem repeat isolated from pericentric region of chicken chromosome 8.

Authors:  Xiaofei Wang; Juan Li; Frederick C Leung
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

3.  Chickens possess centromeres with both extended tandem repeats and short non-tandem-repetitive sequences.

Authors:  Wei-Hao Shang; Tetsuya Hori; Atsushi Toyoda; Jun Kato; Kris Popendorf; Yasubumi Sakakibara; Asao Fujiyama; Tatsuo Fukagawa
Journal:  Genome Res       Date:  2010-06-09       Impact factor: 9.043

4.  The repetitive landscape of the chicken genome.

Authors:  Thomas Wicker; Jon S Robertson; Stefan R Schulze; F Alex Feltus; Vincent Magrini; Jason A Morrison; Elaine R Mardis; Richard K Wilson; Daniel G Peterson; Andrew H Paterson; Robert Ivarie
Journal:  Genome Res       Date:  2004-07-15       Impact factor: 9.043

5.  Three-dimensional architecture of tandem repeats in chicken interphase nucleus.

Authors:  Antonina Maslova; Anna Zlotina; Nadezhda Kosyakova; Marina Sidorova; Alla Krasikova
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

Review 6.  Review. Meiotic drive and sex determination: molecular and cytological mechanisms of sex ratio adjustment in birds.

Authors:  Joanna Rutkowska; Alexander V Badyaev
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2008-05-12       Impact factor: 6.237

7.  Tandem 41-bp repeats in chicken and Japanese quail genomes: FISH mapping and transcription analysis on lampbrush chromosomes.

Authors:  Svetlana Deryusheva; Alla Krasikova; Tatiana Kulikova; Elena Gaginskaya
Journal:  Chromosoma       Date:  2007-07-10       Impact factor: 4.316

8.  Occupancy of the majority of DNA in the chicken W chromosome by bent-repetitive sequences.

Authors:  Y Saitoh; H Saitoh; K Ohtomo; S Mizuno
Journal:  Chromosoma       Date:  1991-10       Impact factor: 4.316

9.  Heterochromatic regions in Japanese quail chromosomes: comprehensive molecular-cytogenetic characterization and 3D mapping in interphase nucleus.

Authors:  Anna Zlotina; Antonina Maslova; Nadezda Kosyakova; Ahmed B Hamid Al-Rikabi; Thomas Liehr; Alla Krasikova
Journal:  Chromosome Res       Date:  2018-12-18       Impact factor: 5.239

10.  Characterization and chromosomal distribution of novel satellite DNA sequences of the lesser rhea (Pterocnemia pennata) and the greater rhea (Rhea americana).

Authors:  Kazuhiko Yamada; Chizuko Nishida-Umehara; Yoichi Matsuda
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

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