Literature DB >> 23575525

From epoxomicin to carfilzomib: chemistry, biology, and medical outcomes.

Kyung Bo Kim1, Craig M Crews.   

Abstract

The initial enthusiasm following the discovery of a pharmacologically active natural product is often fleeting due to the poor prospects for its ultimate clinical application. Despite this, the ever-changing landscape of modern biology has a constant need for molecular probes that can aid in our understanding of biological processes. After its initial discovery by Bristol-Myers Squibb as a microbial anti-tumor natural product, epoxomicin was deemed unfit for development due to its peptide structure and potentially labile epoxyketone pharmacophore. Despite its drawbacks, epoxomicin's pharmacophore was found to provide unprecedented selectivity for the proteasome. Epoxomicin also served as a scaffold for the generation of a synthetic tetrapeptide epoxyketone with improved activity, YU-101, which became the parent lead compound of carfilzomib (Kyprolis™), the recently approved therapeutic agent for multiple myeloma. In this era of rational drug design and high-throughput screening, the prospects for turning an active natural product into an approved therapy are often slim. However, by understanding the journey that began with the discovery of epoxomicin and ended with the successful use of carfilzomib in the clinic, we may find new insights into the keys for success in natural product-based drug discovery.

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Year:  2013        PMID: 23575525      PMCID: PMC3815659          DOI: 10.1039/c3np20126k

Source DB:  PubMed          Journal:  Nat Prod Rep        ISSN: 0265-0568            Impact factor:   13.423


  28 in total

Review 1.  Marine natural products.

Authors:  John W Blunt; Brent R Copp; Robert A Keyzers; Murray H G Munro; Michèle R Prinsep
Journal:  Nat Prod Rep       Date:  2011-12-22       Impact factor: 13.423

Review 2.  Anticancer drug discovery from the marine environment.

Authors:  Candida Nastrucci; Alfredo Cesario; Patrizia Russo
Journal:  Recent Pat Anticancer Drug Discov       Date:  2012-05-01       Impact factor: 4.169

Review 3.  Activity-based protein profiling for natural product target discovery.

Authors:  Joanna Krysiak; Rolf Breinbauer
Journal:  Top Curr Chem       Date:  2012

Review 4.  The ubiquitin system.

Authors:  A Hershko; A Ciechanover
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

Review 5.  Chemical genetics-based target identification in drug discovery.

Authors:  Feng Cong; Atwood K Cheung; Shih-Min A Huang
Journal:  Annu Rev Pharmacol Toxicol       Date:  2011-08-02       Impact factor: 13.820

6.  The anti-angiogenic agent fumagillin covalently binds and inhibits the methionine aminopeptidase, MetAP-2.

Authors:  N Sin; L Meng; M Q Wang; J J Wen; W G Bornmann; C M Crews
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-10       Impact factor: 11.205

7.  Nonproteasomal targets of the proteasome inhibitors bortezomib and carfilzomib: a link to clinical adverse events.

Authors:  Shirin Arastu-Kapur; Janet L Anderl; Marianne Kraus; Francesco Parlati; Kevin D Shenk; Susan J Lee; Tony Muchamuel; Mark K Bennett; Christoph Driessen; Andrew J Ball; Christopher J Kirk
Journal:  Clin Cancer Res       Date:  2011-03-01       Impact factor: 12.531

8.  Total synthesis of the potent proteasome inhibitor epoxomicin: a useful tool for understanding proteasome biology.

Authors:  N Sin; K B Kim; M Elofsson; L Meng; H Auth; B H Kwok; C M Crews
Journal:  Bioorg Med Chem Lett       Date:  1999-08-02       Impact factor: 2.823

9.  Epoxomicin, a potent and selective proteasome inhibitor, exhibits in vivo antiinflammatory activity.

Authors:  L Meng; R Mohan; B H Kwok; M Elofsson; N Sin; C M Crews
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-31       Impact factor: 11.205

Review 10.  Chemical-genetic approaches for exploring the mode of action of natural products.

Authors:  Andres Lopez; Ainslie B Parsons; Corey Nislow; Guri Giaever; Charles Boone
Journal:  Prog Drug Res       Date:  2008
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  36 in total

1.  Covalent Tethering of Fragments For Covalent Probe Discovery.

Authors:  Stefan G Kathman; Alexander V Statsyuk
Journal:  Medchemcomm       Date:  2016-01-28       Impact factor: 3.597

2.  Polymer micelle formulations of proteasome inhibitor carfilzomib for improved metabolic stability and anticancer efficacy in human multiple myeloma and lung cancer cell lines.

Authors:  Lin Ao; Derek Reichel; Di Hu; Hyunyoung Jeong; Kyung Bo Kim; Younsoo Bae; Wooin Lee
Journal:  J Pharmacol Exp Ther       Date:  2015-08-26       Impact factor: 4.030

3.  Phase I dose escalation trial of the novel proteasome inhibitor carfilzomib in patients with relapsed chronic lymphocytic leukemia and small lymphocytic lymphoma.

Authors:  Farrukh T Awan; Joseph M Flynn; Jeffrey A Jones; Leslie A Andritsos; Kami J Maddocks; Ellen J Sass; Margaret S Lucas; Weihong Chase; Sharon Waymer; Yonghua Ling; Yao Jiang; Mitch A Phelps; John C Byrd; David M Lucas; Jennifer A Woyach
Journal:  Leuk Lymphoma       Date:  2015-03-11

Review 4.  Biological targets and mechanisms of action of natural products from marine cyanobacteria.

Authors:  Lilibeth A Salvador-Reyes; Hendrik Luesch
Journal:  Nat Prod Rep       Date:  2015-03       Impact factor: 13.423

5.  Functional chromatography reveals three natural products that target the same protein with distinct mechanisms of action.

Authors:  Min Jin Kang; Tongde Wu; E M Kithsiri Wijeratne; Eric C Lau; Damian J Mason; Celestina Mesa; Joseph Tillotson; Donna D Zhang; A A Leslie Gunatilaka; James J La Clair; Eli Chapman
Journal:  Chembiochem       Date:  2014-08-14       Impact factor: 3.164

6.  Identifying the Minimal Enzymes Required for Biosynthesis of Epoxyketone Proteasome Inhibitors.

Authors:  Joyce Liu; Xuejun Zhu; Wenjun Zhang
Journal:  Chembiochem       Date:  2015-11-02       Impact factor: 3.164

7.  The proteasome as a druggable target with multiple therapeutic potentialities: Cutting and non-cutting edges.

Authors:  G R Tundo; D Sbardella; A M Santoro; A Coletta; F Oddone; G Grasso; D Milardi; P M Lacal; S Marini; R Purrello; G Graziani; M Coletta
Journal:  Pharmacol Ther       Date:  2020-05-19       Impact factor: 12.310

Review 8.  Small-Molecule Screens: A Gateway to Cancer Therapeutic Agents with Case Studies of Food and Drug Administration-Approved Drugs.

Authors:  Nathan P Coussens; John C Braisted; Tyler Peryea; G Sitta Sittampalam; Anton Simeonov; Matthew D Hall
Journal:  Pharmacol Rev       Date:  2017-10       Impact factor: 25.468

Review 9.  Natural products as modulators of eukaryotic protein secretion.

Authors:  Hendrik Luesch; Ville O Paavilainen
Journal:  Nat Prod Rep       Date:  2020-02-18       Impact factor: 13.423

10.  Selective degradation of splicing factor CAPERα by anticancer sulfonamides.

Authors:  Taisuke Uehara; Yukinori Minoshima; Koji Sagane; Naoko Hata Sugi; Kaoru Ogawa Mitsuhashi; Noboru Yamamoto; Hiroshi Kamiyama; Kentaro Takahashi; Yoshihiko Kotake; Mai Uesugi; Akira Yokoi; Atsushi Inoue; Taku Yoshida; Miyuki Mabuchi; Akito Tanaka; Takashi Owa
Journal:  Nat Chem Biol       Date:  2017-04-24       Impact factor: 15.040

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