Literature DB >> 22025071

Activity-based protein profiling for natural product target discovery.

Joanna Krysiak1, Rolf Breinbauer.   

Abstract

Natural products represent an important treasure box of biologically active molecules, from which many drug candidates have been sourced. The identification of the target proteins addressed by these natural products is a foremost goal for which new techniques are required. Activity-based protein profiling (ABPP), exploiting protein-reactive functional groups present in many natural products, offers unseen opportunities in this respect. This review article describes the current status of this field. Many examples are given for the annotation of biological target proteins of natural products containing epoxides, lactones, lactams, Michael acceptors, and other electrophilic groups. In addition, the development of probe molecules identified from biomimetic natural product libraries is discussed.

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Year:  2012        PMID: 22025071     DOI: 10.1007/128_2011_289

Source DB:  PubMed          Journal:  Top Curr Chem        ISSN: 0340-1022


  9 in total

Review 1.  Chalcone: A Privileged Structure in Medicinal Chemistry.

Authors:  Chunlin Zhuang; Wen Zhang; Chunquan Sheng; Wannian Zhang; Chengguo Xing; Zhenyuan Miao
Journal:  Chem Rev       Date:  2017-05-10       Impact factor: 60.622

Review 2.  From epoxomicin to carfilzomib: chemistry, biology, and medical outcomes.

Authors:  Kyung Bo Kim; Craig M Crews
Journal:  Nat Prod Rep       Date:  2013-05       Impact factor: 13.423

3.  Target discovery of acivicin in cancer cells elucidates its mechanism of growth inhibition†Electronic supplementary information (ESI) available: Synthesis, cloning, protein expression, purification and biochemical assays. See DOI: 10.1039/c4sc02339k.

Authors:  Johannes Kreuzer; Nina C Bach; Daniel Forler; Stephan A Sieber
Journal:  Chem Sci       Date:  2014-09-26       Impact factor: 9.825

4.  Targets Fishing and Identification of Calenduloside E as Hsp90AB1: Design, Synthesis, and Evaluation of Clickable Activity-Based Probe.

Authors:  Shan Wang; Yu Tian; Jing-Yi Zhang; Hui-Bo Xu; Ping Zhou; Min Wang; Sen-Bao Lu; Yun Luo; Min Wang; Gui-Bo Sun; Xu-Dong Xu; Xiao-Bo Sun
Journal:  Front Pharmacol       Date:  2018-05-23       Impact factor: 5.810

Review 5.  Advanced Activity-Based Protein Profiling Application Strategies for Drug Development.

Authors:  Shan Wang; Yu Tian; Min Wang; Min Wang; Gui-Bo Sun; Xiao-Bo Sun
Journal:  Front Pharmacol       Date:  2018-04-09       Impact factor: 5.810

Review 6.  Activity-Based Protein Profiling (ABPP) of Oxidoreductases.

Authors:  Rita Fuerst; Rolf Breinbauer
Journal:  Chembiochem       Date:  2020-10-20       Impact factor: 3.164

7.  Design and synthesis of acetaminophen probe APAP-P1 for identification of the toxicity targets thioredoxin reductase-1 in HepaRG cells.

Authors:  Shan Wang; Yu Tian; Shan Lu; Ruiying Wang; Hai Shang; Xuelian Zhang; Chenyang Zhang; Guibo Sun; Xudong Xu; Xiaobo Sun
Journal:  RSC Adv       Date:  2019-05-15       Impact factor: 4.036

8.  Investigating Peptide-Coenzyme A Conjugates as Chemical Probes for Proteomic Profiling of N-Terminal and Lysine Acetyltransferases.

Authors:  Julia Sindlinger; Stefan Schön; Jürgen Eirich; Sören Kirchgäßner; Iris Finkemeier; Dirk Schwarzer
Journal:  Chembiochem       Date:  2022-07-25       Impact factor: 3.461

Review 9.  Cancer wars: natural products strike back.

Authors:  Christine Basmadjian; Qian Zhao; Embarek Bentouhami; Amel Djehal; Canan G Nebigil; Roger A Johnson; Maria Serova; Armand de Gramont; Sandrine Faivre; Eric Raymond; Laurent G Désaubry
Journal:  Front Chem       Date:  2014-05-01       Impact factor: 5.221

  9 in total

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