| Literature DB >> 23555097 |
Diana Stone1, Margaret Davis, Katherine Baker, Tom Besser, Rohini Roopnarine, Ravindra Sharma.
Abstract
This study determined whether multilocus sequence types (MLST) of Campylobacter from poultry in 2 farms in Grenada, West Indies, differed by farm, antimicrobial resistance and farm antibiotic use. Farm A used fluoroquinolones in the water and Farm B used tetracyclines. The E-test was used to determine resistance of isolates to seven antibiotics. PCR of the IpxA gene confirmed species and MLST was used to characterize 38 isolates. All isolates were either C. jejuni or C. coli. Farm antibiotic use directly correlated with antimicrobial resistance of Campylobacter isolates. Almost 80% of the isolates from Farm A were fluoroquinolone resistant and 17.9% of the isolates from Farm B were fluoroquinolone resistant. All Campylobacter isolates from Farm A were tetracycline sensitive, whereas 35.7% of isolates from Farm B were tetracycline resistant. Six previously recognized sequence types (STs) and 2 novel STs were identified. Previously recognized STs were those overwhelmingly reported from poultry and humans globally. Isolates with the same ST did not always have the same antibiotic resistance profile. There was little ST overlap between the farms suggesting that within-farm transmission of Campylobacter genotypes may dominate. MLST typing was useful for tracking Campylobacter spp. among poultry units and can help elucidate Campylobacter host-species population structure and its relevance to human health.Entities:
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Year: 2013 PMID: 23555097 PMCID: PMC3595693 DOI: 10.1155/2013/794643
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Clonal complexes and allelic profiles from 38 Campylobacter jejuni/coli strains isolated from broilers in Grenada.
| Farm | CC | ST | Allele number | ||||||
|---|---|---|---|---|---|---|---|---|---|
| ASP | GLN | GLT | GLY | PGM | TKT | UNC | |||
| A | ST-443 | 51 (5) | 7 | 17 | 2 | 15 | 23 | 3 | 12 |
| ST-828* | 1173 (5) | 33 | 39 | 30 | 82 | 113 | 56 | 17 | |
| ST-607 | 2927 (1) | 166 | 2 | 5 | 10 | 151 | 3 | 1 | |
| ST-353 | 353 (3) | 7 | 17 | 5 | 2 | 10 | 3 | 6 | |
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| 7 | 84 | 5 | 2 | 11 | 1 | 6 | ||
| ‡ |
| 129 | 39 | 65 | 82 | 113 | 47 | 17 | |
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| B | ST-354 | 354 (13) | 8 | 10 | 2 | 2 | 11 | 12 | 6 |
| ST-464 | 464 (3) | 24 | 2 | 2 | 2 | 10 | 3 | 1 | |
| ‡ |
| 129 | 39 | 65 | 82 | 113 | 47 | 17 | |
Numbers in parentheses after each ST denote the number of isolates.
CC: clonal complex.
ST: sequence types.
*Clonal complex associated with C. coli.
†Novel STs identified.
‡No clonal complex assigned yet.
The distribution of source host species for clonal complexes detected in Grenada Campylobacter jejuni/coli broiler isolates represented in the international PubMLST database.
| Source* | ST-353 clonal complex | ST-354 clonal complex | ST-443 clonal complex | ST-464 clonal complex | ST-607 clonal complex | ST-828 clonal complex |
|---|---|---|---|---|---|---|
| Ruminant | 2 (0.5) | 10 (4.2) | 2 (0.9) | 0 (0) | 1 (0.8) | 162 (10.4) |
| Chicken | 92 (22.8) | 64 (27.1) | 60 (27.4) | 24 (24) | 35 (29.7) | 523 (33.4) |
| Other poultry | 7 (1.7) | 3 (1.3) | 1 (0.5) | 1 (1) | 0 (0) | 96 (6.1) |
| Human | 301 (74.7) | 158 (66.9) | 156 (71.2) | 75 (75) | 82 (69.5) | 378 (24.2) |
| Pig | 1 (0.2) | 1 (0.4) | 0 (0) | 0 (0) | 0 (0) | 405 (25.9) |
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| Total | 403 (100.0) | 236 (100.0) | 219 (100.0) | 100 (100.0) | 118 (100.0) | 1564 (100.0) |
*Ruminant: calf, cattle, cow's milk, goat, sheep; Chicken: chicken, chicken offal or meat; Other poultry: goose, turkey; Human: human stool, human blood, human unspecified; Pig: pig, pork offal or meat.
Campylobacter clonal complex STs identified in broilers from farms A and B that have been previously reported to PubMLST from Grenada and other countries.
| ST-353 | ST-354 | ST-443 | ST-464 | ST-607 | ST-828 | |
|---|---|---|---|---|---|---|
| 353 | 354 | 51 | 464 | 2927 | 1173 | |
| UK | x | x | x | x | x | |
| The Netherlands | x | x | x | x | ||
| Germany | x | x | x | x | ||
| Spain | x | x | ||||
| Switzerland | x | x | ||||
| Greece | x | x | ||||
| Belgium | x | |||||
| USA | x | x | x | x | ||
| Canada | x | x | x | x | ||
| Australia | x | x | ||||
| Thailand | x | x | x | x | ||
| Japan | x | |||||
| Curacao | X | x | ||||
| Grenada | X | x | X | x | ||
| Number of records in PubMLST | 50 | 50 | 97 | 30 | 2 | 6 |
| Species |
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Figure 1Neighbor-joining tree constructed from eight STs identified among 38 Campylobacter jejuni/coli isolates from broilers in Grenada at slaughter on two farms (A and B). Tree branches are labeled with the corresponding clonal complex assignments.
Antibiotic sensitivity/resistance profiles of 51 Campylobacter jejuni/coli isolates from broilers on Farms A and B in Grenada.
| Antibiotic* | Farm A | Farm B |
|
|---|---|---|---|
| Sen/Resist (% R) | Sen/Resist (%R) | % resistant† | |
| Gen | 23/0 (0%) | 22/6 (21.4%) |
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| Chlor | 22/1 (0.04%) | 25/3 (10.7%) |
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| Cipro‡ | 6/17 (73.9%) | 23/5 (17.9%) |
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| Amp | 20/3 (13%) | 27/1 (3.6%) |
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| Tetra$ | 23/0 (0%) | 18/10 (35.7%) |
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| Eryth | 23/0 (0%) | 23/5 (17.9) |
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| Metroni | 17/6 (26.1%) | 7/21 (75.0%) |
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*Gen: gentamicin; Chlor: chloramphenicol; Cipro: ciprofloxacin; Amp: ampicillin; Tetra: tetracycline; Eryth: erythromycin; Metroni: metronidazole.
†Fischer's exact two-tailed test.
‡Antibiotic used on Farm A.
$Antibiotic used on Farm B.
Fluoroquinolone and tetracycline sensitivity/resistance of Campylobacter jejuni/coli isolates by MLST profile from broilers on Farms A and B in Grenada.
| Farm/antimicrobial used | CC | ST | Antimicrobial sensitivity/resistance | |
|---|---|---|---|---|
| Fluoroquinolone | Tetracycline | |||
| Farm A-fluoroquinolone | ST-443 | 51 (3) | S | S |
| 51 (2) |
| S | ||
| ST-828 | 1173 (1) | S | S | |
| 1173 (4) |
| S | ||
| ST-607 | 2927 (1) |
| S | |
| ST-353 | 353 (3) |
| S | |
| 5490 (1) | S | S | ||
| 5490 (1) |
| S | ||
| No CC assigned | 5491 (4) |
| S | |
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| Farm B-tetracycline | ST-354 | 354 (10) | S | S |
| 354 (3) | S |
| ||
| ST-464 | 464 (2) | S | S | |
| 464 (1) | S |
| ||
| No CC assigned | 5491 (2) | S | S | |
CC: clonal complex.
ST: sequence types.
Numbers in parentheses after each ST denote the number of isolates.
S: sensitive.
R: resistant.