| Literature DB >> 23554820 |
Mau Sinha1, Sanket Kaushik, Punit Kaur, Sujata Sharma, Tej P Singh.
Abstract
Lactoferrin is a multifunctional, iron-binding glycoprotein which displays a wide array of modes of action to execute its primary antimicrobial function. It contains various antimicrobial peptides which are released upon its hydrolysis by proteases. These peptides display a similarity with the antimicrobial cationic peptides found in nature. In the current scenario of increasing resistance to antibiotics, there is a need for the discovery of novel antimicrobial drugs. In this context, the structural and functional perspectives on some of the antimicrobial peptides found in N-lobe of lactoferrin have been reviewed. This paper provides the comparison of lactoferrin peptides with other antimicrobial peptides found in nature as well as interspecies comparison of the structural properties of these peptides within the native lactoferrin.Entities:
Year: 2013 PMID: 23554820 PMCID: PMC3608178 DOI: 10.1155/2013/390230
Source DB: PubMed Journal: Int J Pept ISSN: 1687-9767
Figure 1(a) Overall structure of lactoferrin showing positions of LF1-11 (blue), lactoferrampin (pink), and lactoferricin (green) peptides in the N-terminal lobe. (b) The zoomed structure showing the position of peptides in detail.
Amino acid sequences of LF1-11 from lactoferrin from six species.
| LF1-11 | Lactoferrampin | Lactoferricin | |
|---|---|---|---|
| Sequence | GRRRSVQWCAV | WNLLRQAQEKFGKDKSP | KCFQWQRNMRKVRGPPVSCIKRDS |
| pI | 11.70 | 9.70 | 10.95 |
| Secondary structure in the intact lactoferrin [X-ray crystallography] | Loop followed by | Amphipathic helix with a C-terminal tail | N-terminal amphipathic helix connected to a |
| Secondary structure when isolated [NMR] | Not known | N-terminal amphipathic alpha-helical conformation across the first 11 residues and random C-terminus | N-terminal amphipathic helix and a random coil |
Figure 2The structural comparison of peptides (a) LF1-11, (b) lactoferrampin, and (c) lactoferricin in the native structure of human lactoferrin (PDB : 1LFG).
Comparison of amino acid sequences of LF1-11 from lactoferrin from six species.
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Comparison of amino acid sequences of lactoferrampin from lactoferrin from six species.
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Amino acid sequences of lactoferricin from lactoferrin from six species.
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Figure 3Helical wheel representation of (a) magainin 2, (b) bombinin, (c) temporin, (d) lactoferrampin, and (e) cecropin A. The hydrophilic residues are shown as circles, hydrophobic residues as diamonds, potentially negatively charged as triangles, and potentially positively charged as pentagons. Hydrophobicity is color coded as well: the most hydrophobic residue is green, and the amount of green is decreasing proportionally to low hydrophobicity, coded as yellow. Hydrophilic residues are coded red with pure red being the uncharged residues, and the amount of red decreasing proportionally to the hydrophilicity. The potentially charged residues are light blue. (The plots were made using the software created by Don Armstrong and Raphael Zidovetzki. Version: 0.10 p06 12/14/2001 DLA modified by Jim Hu.)
Comparison of amino acid sequences of lactoferricin and other tryptophan and arginine containing antimicrobial peptides. The active hexapeptide of lactoferricin and its corresponding matching residues in other antimicrobial peptides are indicated in red.
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