Literature DB >> 23083717

Structure and orientation of bovine lactoferrampin in the mimetic bacterial membrane as revealed by solid-state NMR and molecular dynamics simulation.

Atsushi Tsutsumi1, Namsrai Javkhlantugs, Atsushi Kira, Masako Umeyama, Izuru Kawamura, Katsuyuki Nishimura, Kazuyoshi Ueda, Akira Naito.   

Abstract

Bovine lactoferrampin (LFampinB) is a newly discovered antimicrobial peptide found in the N1-domain of bovine lactoferrin (268-284), and consists of 17 amino-acid residues. It is important to determine the orientation and structure of LFampinB in bacterial membranes to reveal the antimicrobial mechanism. We therefore performed (13)C and (31)P NMR, (13)C-(31)P rotational echo double resonance (REDOR), potassium ion-selective electrode, and quartz-crystal microbalance measurements for LFampinB with mimetic bacterial membrane and molecular-dynamics simulation in acidic membrane. (31)P NMR results indicated that LFampinB caused a defect in mimetic bacterial membranes. Ion-selective electrode measurements showed that ion leakage occurred for the mimetic bacterial membrane containing cardiolipin. Quartz-crystal microbalance measurements revealed that LFampinB had greater affinity to acidic phospholipids than that to neutral phospholipids. (13)C DD-MAS and static NMR spectra showed that LFampinB formed an α-helix in the N-terminus region and tilted 45° to the bilayer normal. REDOR dephasing patterns between carbonyl carbon nucleus in LFampinB and phosphorus nuclei in lipid phosphate groups were measured by (13)C-(31)P REDOR and the results revealed that LFampinB is located in the interfacial region of the membrane. Molecular-dynamics simulation showed the tilt angle to be 42° and the rotation angle to be 92.5° for Leu(3), which are in excellent agreement with the experimental values.
Copyright © 2012 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 23083717      PMCID: PMC3475389          DOI: 10.1016/j.bpj.2012.09.010

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  38 in total

1.  Morphological behavior of lipid bilayers induced by melittin near the phase transition temperature.

Authors:  Shuichi Toraya; Takashi Nagao; Kazushi Norisada; Satoru Tuzi; Hazime Saitô; Shunsuke Izumi; Akira Naito
Journal:  Biophys J       Date:  2005-08-19       Impact factor: 4.033

2.  Toroidal pores formed by antimicrobial peptides show significant disorder.

Authors:  Durba Sengupta; Hari Leontiadou; Alan E Mark; Siewert-Jan Marrink
Journal:  Biochim Biophys Acta       Date:  2008-06-18

Review 3.  Structure elucidation of membrane-associated peptides and proteins in oriented bilayers by solid-state NMR spectroscopy.

Authors:  Akira Naito
Journal:  Solid State Nucl Magn Reson       Date:  2009-07-08       Impact factor: 2.293

4.  High-resolution conformation of gramicidin A in a lipid bilayer by solid-state NMR.

Authors:  R R Ketchem; W Hu; T A Cross
Journal:  Science       Date:  1993-09-10       Impact factor: 47.728

5.  Molecular dynamics simulation of Bombolitin II in the dipalmitoylphosphatidylcholine membrane bilayer.

Authors:  Namsrai Javkhlantugs; Akira Naito; Kazuyoshi Ueda
Journal:  Biophys J       Date:  2011-09-07       Impact factor: 4.033

6.  An antimicrobial peptide, magainin 2, induced rapid flip-flop of phospholipids coupled with pore formation and peptide translocation.

Authors:  K Matsuzaki; O Murase; N Fujii; K Miyajima
Journal:  Biochemistry       Date:  1996-09-03       Impact factor: 3.162

7.  Conformation and dynamics of melittin bound to magnetically oriented lipid bilayers by solid-state (31)P and (13)C NMR spectroscopy.

Authors:  A Naito; T Nagao; K Norisada; T Mizuno; S Tuzi; H Saitô
Journal:  Biophys J       Date:  2000-05       Impact factor: 4.033

8.  Interaction of epicatechin gallate with phospholipid membranes as revealed by solid-state NMR spectroscopy.

Authors:  Yoshinori Uekusa; Miya Kamihira-Ishijima; Osamu Sugimoto; Takeshi Ishii; Shigenori Kumazawa; Kozo Nakamura; Ken-ichi Tanji; Akira Naito; Tsutomu Nakayama
Journal:  Biochim Biophys Acta       Date:  2011-02-23

9.  Characterization of magnetically orientable bilayers in mixtures of dihexanoylphosphatidylcholine and dimyristoylphosphatidylcholine by solid-state NMR.

Authors:  C R Sanders; J P Schwonek
Journal:  Biochemistry       Date:  1992-09-22       Impact factor: 3.162

10.  Interaction of antimicrobial dermaseptin and its fluorescently labeled analogues with phospholipid membranes.

Authors:  Y Pouny; D Rapaport; A Mor; P Nicolas; Y Shai
Journal:  Biochemistry       Date:  1992-12-15       Impact factor: 3.162

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  5 in total

Review 1.  Dynamic membrane interactions of antibacterial and antifungal biomolecules, and amyloid peptides, revealed by solid-state NMR spectroscopy.

Authors:  Akira Naito; Nobuaki Matsumori; Ayyalusamy Ramamoorthy
Journal:  Biochim Biophys Acta Gen Subj       Date:  2017-06-06       Impact factor: 3.770

2.  Lipid composition-dependent membrane fragmentation and pore-forming mechanisms of membrane disruption by pexiganan (MSI-78).

Authors:  Dong-Kuk Lee; Jeffrey R Brender; Michele F M Sciacca; Janarthanan Krishnamoorthy; Changsu Yu; Ayyalusamy Ramamoorthy
Journal:  Biochemistry       Date:  2013-04-29       Impact factor: 3.162

Review 3.  Membrane Active Peptides and Their Biophysical Characterization.

Authors:  Fatma Gizem Avci; Berna Sariyar Akbulut; Elif Ozkirimli
Journal:  Biomolecules       Date:  2018-08-22

Review 4.  Mechanisms of Action for Antimicrobial Peptides With Antibacterial and Antibiofilm Functions.

Authors:  Nigare Raheem; Suzana K Straus
Journal:  Front Microbiol       Date:  2019-12-12       Impact factor: 5.640

5.  Antimicrobial lactoferrin peptides: the hidden players in the protective function of a multifunctional protein.

Authors:  Mau Sinha; Sanket Kaushik; Punit Kaur; Sujata Sharma; Tej P Singh
Journal:  Int J Pept       Date:  2013-02-13
  5 in total

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