Literature DB >> 23552623

The dynamic bacterial communities of a melting High Arctic glacier snowpack.

Katherina Hell1, Arwyn Edwards, Jakub Zarsky, Sabine M Podmirseg, Susan Girdwood, Justin A Pachebat, Heribert Insam, Birgit Sattler.   

Abstract

Snow environments can occupy over a third of land surface area, but little is known about the dynamics of snowpack bacteria. The effect of snow melt on bacterial community structure and diversity of surface environments of a Svalbard glacier was examined using analyses of 16S rRNA genes via T-RFLP, qPCR and 454 pyrosequencing. Distinct community structures were found in different habitat types, with changes over 1 week apparent, in particular for the dominant bacterial class present, Betaproteobacteria. The differences observed were consistent with influences from depositional mode (snowfall vs aeolian dusts), contrasting snow with dust-rich snow layers and near-surface ice. Contrary to that, slush as the decompositional product of snow harboured distinct lineages of bacteria, further implying post-depositional changes in community structure. Taxa affiliated to the betaproteobacterial genus Polaromonas were particularly dynamic, and evidence for the presence of betaproteobacterial ammonia-oxidizing bacteria was uncovered, inviting the prospect that the dynamic bacterial communities associated with snowpacks may be active in supraglacial nitrogen cycling and capable of rapid responses to changes induced by snowmelt. Furthermore the potential of supraglacial snowpack ecosystems to respond to transient yet spatially extensive melting episodes such as that observed across most of Greenland's ice sheet in 2012 merits further investigation.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23552623      PMCID: PMC3749494          DOI: 10.1038/ismej.2013.51

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  28 in total

Review 1.  Psychrophilic bacteria.

Authors:  R Y Morita
Journal:  Bacteriol Rev       Date:  1975-06

2.  Diversity and characterization of mercury-resistant bacteria in snow, freshwater and sea-ice brine from the High Arctic.

Authors:  Annette K Møller; Tamar Barkay; Waleed Abu Al-Soud; Søren J Sørensen; Henrik Skov; Niels Kroer
Journal:  FEMS Microbiol Ecol       Date:  2010-12-17       Impact factor: 4.194

Review 3.  Patterns and mechanisms of genetic and phenotypic differentiation in marine microbes.

Authors:  Martin F Polz; Dana E Hunt; Sarah P Preheim; Daniel M Weinreich
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2006-11-29       Impact factor: 6.237

Review 4.  A guide to the natural history of freshwater lake bacteria.

Authors:  Ryan J Newton; Stuart E Jones; Alexander Eiler; Katherine D McMahon; Stefan Bertilsson
Journal:  Microbiol Mol Biol Rev       Date:  2011-03       Impact factor: 11.056

5.  Bacterial characterization of the snow cover at Spitzberg, Svalbard.

Authors:  Pierre Amato; Raphaëlle Hennebelle; Olivier Magand; Martine Sancelme; Anne-Marie Delort; Carlo Barbante; Claude Boutron; Christophe Ferrari
Journal:  FEMS Microbiol Ecol       Date:  2007-02       Impact factor: 4.194

6.  Community analysis of the bacterial assemblages in the winter cover and pelagic layers of a high mountain lake by in situ hybridization.

Authors:  A Alfreider; J Pernthaler; R Amann; B Sattler; F Glockner; A Wille; R Psenner
Journal:  Appl Environ Microbiol       Date:  1996-06       Impact factor: 4.792

7.  Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments.

Authors:  G A Kowalchuk; J R Stephen; W De Boer; J I Prosser; T M Embley; J W Woldendorp
Journal:  Appl Environ Microbiol       Date:  1997-04       Impact factor: 4.792

Review 8.  Deposition and postdeposition mechanisms as possible drivers of microbial population variability in glacier ice.

Authors:  Shu-Rong Xiang; Tian-Cui Shang; Yong Chen; Tan-Dong Yao
Journal:  FEMS Microbiol Ecol       Date:  2009-08-03       Impact factor: 4.194

9.  The genome of Polaromonas sp. strain JS666: insights into the evolution of a hydrocarbon- and xenobiotic-degrading bacterium, and features of relevance to biotechnology.

Authors:  Timothy E Mattes; Anne K Alexander; Paul M Richardson; A Christine Munk; Cliff S Han; Paul Stothard; Nicholas V Coleman
Journal:  Appl Environ Microbiol       Date:  2008-08-22       Impact factor: 4.792

Review 10.  Cold adaptation of microorganisms.

Authors:  N J Russell
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1990-01-30       Impact factor: 6.237

View more
  27 in total

Review 1.  Microbial ecology of the cryosphere: sea ice and glacial habitats.

Authors:  Antje Boetius; Alexandre M Anesio; Jody W Deming; Jill A Mikucki; Josephine Z Rapp
Journal:  Nat Rev Microbiol       Date:  2015-09-07       Impact factor: 60.633

2.  Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier.

Authors:  Thomas Rime; Martin Hartmann; Beat Frey
Journal:  ISME J       Date:  2016-01-15       Impact factor: 10.302

3.  Microbial abundance and community structure in a melting alpine snowpack.

Authors:  Anna Lazzaro; Andrea Wismer; Martin Schneebeli; Isolde Erny; Josef Zeyer
Journal:  Extremophiles       Date:  2015-03-18       Impact factor: 2.395

4.  Diversity and Assembling Processes of Bacterial Communities in Cryoconite Holes of a Karakoram Glacier.

Authors:  Roberto Ambrosini; Federica Musitelli; Federico Navarra; Ilario Tagliaferri; Isabella Gandolfi; Giuseppina Bestetti; Christoph Mayer; Umberto Minora; Roberto Sergio Azzoni; Guglielmina Diolaiuti; Claudio Smiraglia; Andrea Franzetti
Journal:  Microb Ecol       Date:  2016-12-21       Impact factor: 4.552

5.  Microbial connectivity and sorting in a High Arctic watershed.

Authors:  Jérôme Comte; Alexander I Culley; Connie Lovejoy; Warwick F Vincent
Journal:  ISME J       Date:  2018-08-07       Impact factor: 10.302

6.  Microbial metabolism directly affects trace gases in (sub) polar snowpacks.

Authors:  K R Redeker; J P J Chong; A Aguion; A Hodson; D A Pearce
Journal:  J R Soc Interface       Date:  2017-12       Impact factor: 4.118

7.  Shifts in rhizosphere fungal community during secondary succession following abandonment from agriculture.

Authors:  S Emilia Hannula; Elly Morriën; Mattias de Hollander; Wim H van der Putten; Johannes A van Veen; Wietse de Boer
Journal:  ISME J       Date:  2017-06-06       Impact factor: 10.302

Review 8.  Microbial genomics amidst the Arctic crisis.

Authors:  Arwyn Edwards; Karen A Cameron; Joseph M Cook; Aliyah R Debbonaire; Eleanor Furness; Melanie C Hay; Sara M E Rassner
Journal:  Microb Genom       Date:  2020-05-11

9.  Exploration of Microbial Diversity of Himalayan Glacier Moraine Soil Using 16S Amplicon Sequencing and Phospholipid Fatty Acid Analysis Approaches.

Authors:  Mingma Thundu Sherpa; Ishfaq Nabi Najar; Sayak Das; Nagendra Thakur
Journal:  Curr Microbiol       Date:  2020-10-28       Impact factor: 2.188

10.  Microbial abundance in surface ice on the Greenland Ice Sheet.

Authors:  Marek Stibal; Erkin Gözdereliler; Karen A Cameron; Jason E Box; Ian T Stevens; Jarishma K Gokul; Morten Schostag; Jakub D Zarsky; Arwyn Edwards; Tristram D L Irvine-Fynn; Carsten S Jacobsen
Journal:  Front Microbiol       Date:  2015-03-24       Impact factor: 5.640

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.