Literature DB >> 23546170

Functional SNPs are enriched for schizophrenia association signals.

S-A Bacanu1, J Chen1, J Sun2, K Richardson3, C-Q Lai3, Z Zhao2, M C O'Donovan4, K S Kendler1, X Chen1.   

Abstract

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Year:  2013        PMID： 23546170      PMCID： PMC7954531          DOI： 10.1038/mp.2013.33

Source DB:  PubMed          Journal:  Mol Psychiatry        ISSN： 1359-4184            Impact factor:   15.992


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  6 in total

1.  Genomic control for association studies.

Authors:  B Devlin; K Roeder
Journal:  Biometrics       Date:  1999-12       Impact factor: 2.571

2.  A genome-wide survey for SNPs altering microRNA seed sites identifies functional candidates in GWAS.

Authors:  Kris Richardson; Chao-Qiang Lai; Laurence D Parnell; Yu-Chi Lee; Jose M Ordovas
Journal:  BMC Genomics       Date:  2011-10-13       Impact factor: 3.969

3.  A map of human genome variation from population-scale sequencing.

Authors:  Gonçalo R Abecasis; David Altshuler; Adam Auton; Lisa D Brooks; Richard M Durbin; Richard A Gibbs; Matt E Hurles; Gil A McVean
Journal:  Nature       Date:  2010-10-28       Impact factor: 49.962

4.  Abundant quantitative trait loci exist for DNA methylation and gene expression in human brain.

Authors:  J Raphael Gibbs; Marcel P van der Brug; Dena G Hernandez; Bryan J Traynor; Michael A Nalls; Shiao-Lin Lai; Sampath Arepalli; Allissa Dillman; Ian P Rafferty; Juan Troncoso; Robert Johnson; H Ronald Zielke; Luigi Ferrucci; Dan L Longo; Mark R Cookson; Andrew B Singleton
Journal:  PLoS Genet       Date:  2010-05-13       Impact factor: 5.917

5.  A mega-analysis of genome-wide association studies for major depressive disorder.

Authors:  Stephan Ripke; Naomi R Wray; Cathryn M Lewis; Steven P Hamilton; Myrna M Weissman; Gerome Breen; Enda M Byrne; Douglas H R Blackwood; Dorret I Boomsma; Sven Cichon; Andrew C Heath; Florian Holsboer; Susanne Lucae; Pamela A F Madden; Nicholas G Martin; Peter McGuffin; Pierandrea Muglia; Markus M Noethen; Brenda P Penninx; Michele L Pergadia; James B Potash; Marcella Rietschel; Danyu Lin; Bertram Müller-Myhsok; Jianxin Shi; Stacy Steinberg; Hans J Grabe; Paul Lichtenstein; Patrik Magnusson; Roy H Perlis; Martin Preisig; Jordan W Smoller; Kari Stefansson; Rudolf Uher; Zoltan Kutalik; Katherine E Tansey; Alexander Teumer; Alexander Viktorin; Michael R Barnes; Thomas Bettecken; Elisabeth B Binder; René Breuer; Victor M Castro; Susanne E Churchill; William H Coryell; Nick Craddock; Ian W Craig; Darina Czamara; Eco J De Geus; Franziska Degenhardt; Anne E Farmer; Maurizio Fava; Josef Frank; Vivian S Gainer; Patience J Gallagher; Scott D Gordon; Sergey Goryachev; Magdalena Gross; Michel Guipponi; Anjali K Henders; Stefan Herms; Ian B Hickie; Susanne Hoefels; Witte Hoogendijk; Jouke Jan Hottenga; Dan V Iosifescu; Marcus Ising; Ian Jones; Lisa Jones; Tzeng Jung-Ying; James A Knowles; Isaac S Kohane; Martin A Kohli; Ania Korszun; Mikael Landen; William B Lawson; Glyn Lewis; Donald Macintyre; Wolfgang Maier; Manuel Mattheisen; Patrick J McGrath; Andrew McIntosh; Alan McLean; Christel M Middeldorp; Lefkos Middleton; Grant M Montgomery; Shawn N Murphy; Matthias Nauck; Willem A Nolen; Dale R Nyholt; Michael O'Donovan; Högni Oskarsson; Nancy Pedersen; William A Scheftner; Andrea Schulz; Thomas G Schulze; Stanley I Shyn; Engilbert Sigurdsson; Susan L Slager; Johannes H Smit; Hreinn Stefansson; Michael Steffens; Thorgeir Thorgeirsson; Federica Tozzi; Jens Treutlein; Manfred Uhr; Edwin J C G van den Oord; Gerard Van Grootheest; Henry Völzke; Jeffrey B Weilburg; Gonneke Willemsen; Frans G Zitman; Benjamin Neale; Mark Daly; Douglas F Levinson; Patrick F Sullivan
Journal:  Mol Psychiatry       Date:  2012-04-03       Impact factor: 15.992

6.  Common polygenic variation contributes to risk of schizophrenia and bipolar disorder.

Authors:  Shaun M Purcell; Naomi R Wray; Jennifer L Stone; Peter M Visscher; Michael C O'Donovan; Patrick F Sullivan; Pamela Sklar
Journal:  Nature       Date:  2009-07-01       Impact factor: 49.962
  6 in total
  14 in total

1.  Expression quantitative trait loci (eQTLs) in microRNA genes are enriched for schizophrenia and bipolar disorder association signals.

Authors:  V S Williamson; M Mamdani; G O McMichael; A H Kim; D Lee; S Bacanu; V I Vladimirov
Journal:  Psychol Med       Date:  2015-03-30       Impact factor: 7.723

2.  Systematic Integration of Brain eQTL and GWAS Identifies ZNF323 as a Novel Schizophrenia Risk Gene and Suggests Recent Positive Selection Based on Compensatory Advantage on Pulmonary Function.

Authors:  Xiong-Jian Luo; Manuel Mattheisen; Ming Li; Liang Huang; Marcella Rietschel; Anders D Børglum; Thomas D Als; Edwin J van den Oord; Karolina A Aberg; Ole Mors; Preben Bo Mortensen; Zhenwu Luo; Franziska Degenhardt; Sven Cichon; Thomas G Schulze; Markus M Nöthen; Bing Su; Zhongming Zhao; Lin Gan; Yong-Gang Yao
Journal:  Schizophr Bull       Date:  2015-03-10       Impact factor: 9.306

Review 3.  The schizophrenia risk gene ZNF804A: clinical associations, biological mechanisms and neuronal functions.

Authors:  H Chang; X Xiao; M Li
Journal:  Mol Psychiatry       Date:  2017-03-14       Impact factor: 15.992

4.  Leveraging interindividual variability of regulatory activity for refining genetic regulation of gene expression in schizophrenia.

Authors:  Maris Alver; Nikolaos Lykoskoufis; Anna Ramisch; Emmanouil T Dermitzakis; Halit Ongen
Journal:  Mol Psychiatry       Date:  2022-09-16       Impact factor: 13.437

5.  Evaluating the dopamine hypothesis of schizophrenia in a large-scale genome-wide association study.

Authors:  Alexis C Edwards; Silviu-Alin Bacanu; Tim B Bigdeli; Arden Moscati; Kenneth S Kendler
Journal:  Schizophr Res       Date:  2016-06-20       Impact factor: 4.939

6.  Top associated SNPs in prostate cancer are significantly enriched in cis-expression quantitative trait loci and at transcription factor binding sites.

Authors:  Junfeng Jiang; Peilin Jia; Bairong Shen; Zhongming Zhao
Journal:  Oncotarget       Date:  2014-08-15

7.  JEPEG: a summary statistics based tool for gene-level joint testing of functional variants.

Authors:  Donghyung Lee; Vernell S Williamson; T Bernard Bigdeli; Brien P Riley; Ayman H Fanous; Vladimir I Vladimirov; Silviu-Alin Bacanu
Journal:  Bioinformatics       Date:  2014-12-12       Impact factor: 6.937

Review 8.  Molecular mechanisms underlying noncoding risk variations in psychiatric genetic studies.

Authors:  X Xiao; H Chang; M Li
Journal:  Mol Psychiatry       Date:  2017-01-03       Impact factor: 15.992

9.  Evidence for Association of Cell Adhesion Molecules Pathway and NLGN1 Polymorphisms with Schizophrenia in Chinese Han Population.

Authors:  Zhengrong Zhang; Hao Yu; Sisi Jiang; Jinmin Liao; Tianlan Lu; Lifang Wang; Dai Zhang; Weihua Yue
Journal:  PLoS One       Date:  2015-12-16       Impact factor: 3.240

10.  A Comprehensive in Silico Analysis of Regulatory SNPs of Human CLEC7A Gene and Its Validation as Genotypic and Phenotypic Disease Marker in Recurrent Vulvovaginal Infections.

Authors:  Namarta Kalia; Manpreet Kaur; Sujata Sharma; Jatinder Singh
Journal:  Front Cell Infect Microbiol       Date:  2018-03-20       Impact factor: 5.293
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