Literature DB >> 23545493

Describing intrinsically disordered proteins at atomic resolution by NMR.

Malene Ringkjøbing Jensen1, Rob W H Ruigrok, Martin Blackledge.   

Abstract

There is growing interest in the development of physical methods to study the conformational behaviour and biological activity of intrinsically disordered proteins (IDPs). In this review recent advances in the elucidation of quantitative descriptions of disordered proteins from nuclear magnetic resonance spectroscopy are presented. Ensemble approaches are particularly well adapted to map the conformational energy landscape sampled by the protein at atomic resolution. Significant advances in development of calibrated approaches to the statistical representation of the conformational behaviour of IDPs are presented, as well as applications to some biologically important systems where disorder plays a crucial role.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23545493     DOI: 10.1016/j.sbi.2013.02.007

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  74 in total

1.  HN-NCA heteronuclear TOCSY-NH experiment for (1)H(N) and (15)N sequential correlations in ((13)C, (15)N) labelled intrinsically disordered proteins.

Authors:  Christoph Wiedemann; Nishit Goradia; Sabine Häfner; Christian Herbst; Matthias Görlach; Oliver Ohlenschläger; Ramadurai Ramachandran
Journal:  J Biomol NMR       Date:  2015-08-18       Impact factor: 2.835

2.  Mechanism and rate constants of the Cdc42 GTPase binding with intrinsically disordered effectors.

Authors:  Xiaodong Pang; Huan-Xiang Zhou
Journal:  Proteins       Date:  2016-03-09

3.  Mechanism of intersubunit ketosynthase-dehydratase interaction in polyketide synthases.

Authors:  Matthew Jenner; Simone Kosol; Daniel Griffiths; Panward Prasongpholchai; Lucio Manzi; Andrew S Barrow; John E Moses; Neil J Oldham; Józef R Lewandowski; Gregory L Challis
Journal:  Nat Chem Biol       Date:  2018-01-08       Impact factor: 15.040

4.  Network representation of protein interactions: Theory of graph description and analysis.

Authors:  Dennis Kurzbach
Journal:  Protein Sci       Date:  2016-06-19       Impact factor: 6.725

5.  A six-dimensional alpha proton detection-based APSY experiment for backbone assignment of intrinsically disordered proteins.

Authors:  Xuejun Yao; Stefan Becker; Markus Zweckstetter
Journal:  J Biomol NMR       Date:  2014-11-04       Impact factor: 2.835

6.  Structural Characterization of N-WASP Domain V Using MD Simulations with NMR and SAXS Data.

Authors:  Maud Chan-Yao-Chong; Célia Deville; Louise Pinet; Carine van Heijenoort; Dominique Durand; Tâp Ha-Duong
Journal:  Biophys J       Date:  2019-02-26       Impact factor: 4.033

7.  Studying backbone torsional dynamics of intrinsically disordered proteins using fluorescence depolarization kinetics.

Authors:  Debapriya DAS; Samrat Mukhopadhyay
Journal:  J Biosci       Date:  2018-07       Impact factor: 1.826

8.  Using 1 HN amide temperature coefficients to define intrinsically disordered regions: An alternative NMR method.

Authors:  Hiroki Okazaki; Naoki Matsuo; Takeshi Tenno; Natsuko Goda; Yoshiki Shigemitsu; Motonori Ota; Hidekazu Hiroaki
Journal:  Protein Sci       Date:  2018-10-03       Impact factor: 6.725

9.  Direct observation of structure and dynamics during phase separation of an elastomeric protein.

Authors:  Sean E Reichheld; Lisa D Muiznieks; Fred W Keeley; Simon Sharpe
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-15       Impact factor: 11.205

10.  Disorder-to-Order Transition of an Active-Site Loop Mediates the Allosteric Activation of Sortase A.

Authors:  Xiaodong Pang; Huan-Xiang Zhou
Journal:  Biophys J       Date:  2015-10-20       Impact factor: 4.033

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