Literature DB >> 23540289

Metabolic engineering: past and future.

Benjamin M Woolston1, Steven Edgar, Gregory Stephanopoulos.   

Abstract

We present here a broad overview of the field of metabolic engineering, describing in the first section the key fundamental principles that define and distinguish it, as well as the technological and intellectual developments over the past approximately 20 years that have led to the current state of the art. Discussion of concepts such as metabolic flux analysis, metabolic control analysis, and rational and combinatorial methods is facilitated by illustrative examples of their application drawn from the extensive metabolic engineering literature. In the second section, we present some of the rapidly emerging technologies that we think will play pivotal roles in the continued growth of the field, from improving production metrics to expanding the range of attainable compounds.

Mesh:

Year:  2013        PMID: 23540289     DOI: 10.1146/annurev-chembioeng-061312-103312

Source DB:  PubMed          Journal:  Annu Rev Chem Biomol Eng        ISSN: 1947-5438            Impact factor:   11.059


  70 in total

1.  Predictable tuning of protein expression in bacteria.

Authors:  Mads T Bonde; Margit Pedersen; Michael S Klausen; Sheila I Jensen; Tune Wulff; Scott Harrison; Alex T Nielsen; Markus J Herrgård; Morten O A Sommer
Journal:  Nat Methods       Date:  2016-01-11       Impact factor: 28.547

Review 2.  Synthetic metabolism: metabolic engineering meets enzyme design.

Authors:  Tobias J Erb; Patrik R Jones; Arren Bar-Even
Journal:  Curr Opin Chem Biol       Date:  2017-01-30       Impact factor: 8.822

3.  Enzyme pathways: C1 metabolism redesigned.

Authors:  Yi-Shu Tai; Kechun Zhang
Journal:  Nat Chem Biol       Date:  2015-06       Impact factor: 15.040

4.  Engineering of a Highly Efficient Escherichia coli Strain for Mevalonate Fermentation through Chromosomal Integration.

Authors:  Jilong Wang; Suthamat Niyompanich; Yi-Shu Tai; Jingyu Wang; Wenqin Bai; Prithviraj Mahida; Tuo Gao; Kechun Zhang
Journal:  Appl Environ Microbiol       Date:  2016-11-21       Impact factor: 4.792

Review 5.  Semi-synthetic artemisinin: a model for the use of synthetic biology in pharmaceutical development.

Authors:  Chris J Paddon; Jay D Keasling
Journal:  Nat Rev Microbiol       Date:  2014-04-01       Impact factor: 60.633

Review 6.  13 C flux analysis of cyanobacterial metabolism.

Authors:  Adeola O Adebiyi; Lara J Jazmin; Jamey D Young
Journal:  Photosynth Res       Date:  2014-10-04       Impact factor: 3.573

7.  The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology.

Authors:  Michal Galdzicki; Kevin P Clancy; Ernst Oberortner; Matthew Pocock; Jacqueline Y Quinn; Cesar A Rodriguez; Nicholas Roehner; Mandy L Wilson; Laura Adam; J Christopher Anderson; Bryan A Bartley; Jacob Beal; Deepak Chandran; Joanna Chen; Douglas Densmore; Drew Endy; Raik Grünberg; Jennifer Hallinan; Nathan J Hillson; Jeffrey D Johnson; Allan Kuchinsky; Matthew Lux; Goksel Misirli; Jean Peccoud; Hector A Plahar; Evren Sirin; Guy-Bart Stan; Alan Villalobos; Anil Wipat; John H Gennari; Chris J Myers; Herbert M Sauro
Journal:  Nat Biotechnol       Date:  2014-06-06       Impact factor: 54.908

Review 8.  After the feature presentation: technologies bridging untargeted metabolomics and biology.

Authors:  Kevin Cho; Nathaniel G Mahieu; Stephen L Johnson; Gary J Patti
Journal:  Curr Opin Biotechnol       Date:  2014-05-06       Impact factor: 9.740

9.  Overcoming heterologous protein interdependency to optimize P450-mediated Taxol precursor synthesis in Escherichia coli.

Authors:  Bradley Walters Biggs; Chin Giaw Lim; Kristen Sagliani; Smriti Shankar; Gregory Stephanopoulos; Marjan De Mey; Parayil Kumaran Ajikumar
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-07       Impact factor: 11.205

10.  High-throughput evaluation of synthetic metabolic pathways.

Authors:  Justin R Klesmith; Timothy A Whitehead
Journal:  Technology (Singap World Sci)       Date:  2015-12-16
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