Literature DB >> 23517223

Identification of an essential active-site residue in the α-D-phosphohexomutase enzyme superfamily.

Yingying Lee1, Ritcha Mehra-Chaudhary, Cristina Furdui, Lesa J Beamer.   

Abstract

UNLABELLED: Enzymes in the α-d-phosphohexomutase superfamily catalyze the conversion of 1-phosphosugars to their 6-phospho counterparts. Their phosphoryl transfer reaction has long been proposed to require general acid-base catalysts, but candidate residues for these key roles have not been identified. In this study, we show through mutagenesis and kinetic studies that a histidine (His329) in the active site is critical for enzyme activity in a well-studied member of the superfamily, phosphomannomutase/phosphoglucomutase from Pseudomonas aeruginosa. Crystallographic characterization of an H329A mutant protein showed no significant changes from the wild-type enzyme, excluding structural disruption as the source of its compromised activity. Mutation of the structurally analogous lysine residue in a related protein, phosphoglucomutase from Salmonella typhimurium, also results in significant catalytic impairment. Analyses of protein-ligand complexes of the P. aeruginosa enzyme show that His329 is appropriately positioned to abstract a proton from the O1/O6 hydroxyl of the phosphosugar substrates, and thus may serve as the general base in the reaction. Histidine is strongly conserved at this position in many proteins in the superfamily, and lysine is also often conserved at a structurally corresponding position, particularly in the phosphoglucomutase enzyme sub-group. These studies shed light on the mechanism of this important enzyme superfamily, and may facilitate the design of mechanism-based inhibitors. DATABASE: Structural data have been deposited in the Protein Data Bank with accession number 4IL8.
© 2013 The Authors Journal compilation © 2013 FEBS.

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Year:  2013        PMID: 23517223     DOI: 10.1111/febs.12249

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  8 in total

1.  Mechanistic Insights on Human Phosphoglucomutase Revealed by Transition Path Sampling and Molecular Dynamics Calculations.

Authors:  Natércia F Brás; Pedro A Fernandes; Maria J Ramos; Steven D Schwartz
Journal:  Chemistry       Date:  2018-01-04       Impact factor: 5.236

2.  Promotion of enzyme flexibility by dephosphorylation and coupling to the catalytic mechanism of a phosphohexomutase.

Authors:  Yingying Lee; Maria T Villar; Antonio Artigues; Lesa J Beamer
Journal:  J Biol Chem       Date:  2014-01-08       Impact factor: 5.157

3.  Biology, Mechanism, and Structure of Enzymes in the α-d-Phosphohexomutase Superfamily.

Authors:  Kyle M Stiers; Andrew G Muenks; Lesa J Beamer
Journal:  Adv Protein Chem Struct Biol       Date:  2017-05-17       Impact factor: 3.507

4.  Induced Structural Disorder as a Molecular Mechanism for Enzyme Dysfunction in Phosphoglucomutase 1 Deficiency.

Authors:  Kyle M Stiers; Bailee N Kain; Abigail C Graham; Lesa J Beamer
Journal:  J Mol Biol       Date:  2016-03-10       Impact factor: 5.469

Review 5.  Mutations in hereditary phosphoglucomutase 1 deficiency map to key regions of enzyme structure and function.

Authors:  Lesa J Beamer
Journal:  J Inherit Metab Dis       Date:  2014-08-29       Impact factor: 4.982

6.  Data on the phosphorylation state of the catalytic serine of enzymes in the α-D-phosphohexomutase superfamily.

Authors:  Yingying Lee; Cristina Furdui; Lesa J Beamer
Journal:  Data Brief       Date:  2016-12-15

7.  Transcriptome-wide survey of gene expression changes and alternative splicing in Trichophyton rubrum in response to undecanoic acid.

Authors:  Niege S Mendes; Tamires A Bitencourt; Pablo R Sanches; Rafael Silva-Rocha; Nilce M Martinez-Rossi; Antonio Rossi
Journal:  Sci Rep       Date:  2018-02-06       Impact factor: 4.379

8.  Structural basis for substrate and product recognition in human phosphoglucomutase-1 (PGM1) isoform 2, a member of the α-D-phosphohexomutase superfamily.

Authors:  Paul Hoff Backe; Jon K Laerdahl; Lene Svendsen Kittelsen; Bjørn Dalhus; Lars Mørkrid; Magnar Bjørås
Journal:  Sci Rep       Date:  2020-03-27       Impact factor: 4.379

  8 in total

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