Literature DB >> 25168163

Mutations in hereditary phosphoglucomutase 1 deficiency map to key regions of enzyme structure and function.

Lesa J Beamer1.   

Abstract

Recent studies have identified phosphoglucomutase 1 (PGM1) deficiency as an inherited metabolic disorder in humans. PGM1 deficiency is classified as both a muscle glycogenosis (type XIV) and a congenital disorder of glycosylation of types I and II. Affected patients show multiple disease phenotypes, reflecting the central role of the enzyme in glucose homeostasis, where it catalyzes the interconversion of glucose 1-phosphate and glucose 6-phosphate. The influence of PGM1 deficiency on protein glycosylation patterns is also widespread, affecting both biosynthesis and processing of glycans and their precursors. To date, 21 different mutations involved in PGM1 deficiency have been identified, including 13 missense mutations resulting in single amino acid changes. Growing clinical interest in PGM1 deficiency prompts a review of the molecular context of these mutations in the three-dimensional structure of the protein. Here the known crystal structure of PGM from rabbit (97 % sequence identity to human) is used to analyze the mutations associated with disease and find that many map to regions with clear significance to enzyme function. In particular, amino acids in and around the active site cleft are frequently involved, including regions responsible for catalysis, binding of the metal ion required for activity, and interactions with the phosphosugar substrate. Several of the known mutations, however, are distant from the active site and appear to manifest their effects indirectly. An understanding of how the different mutations that cause PGM1 deficiency affect enzyme structure and function is foundational to providing clinical prognosis and the development of effective treatment strategies.

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Year:  2014        PMID: 25168163     DOI: 10.1007/s10545-014-9757-9

Source DB:  PubMed          Journal:  J Inherit Metab Dis        ISSN: 0141-8955            Impact factor:   4.982


  34 in total

1.  Breaking the covalent connection: Chain connectivity and the catalytic reaction of PMM/PGM.

Authors:  Andrew M Schramm; Dale Karr; Ritcha Mehra-Chaudhary; Steven R Van Doren; Cristina M Furdui; Lesa J Beamer
Journal:  Protein Sci       Date:  2010-06       Impact factor: 6.725

2.  Muscle glycogenosis due to phosphoglucomutase 1 deficiency.

Authors:  Tanya Stojkovic; John Vissing; François Petit; Monique Piraud; Mette C Orngreen; Grete Andersen; Kristl G Claeys; Claire Wary; Jean-Yves Hogrel; Pascal Laforêt
Journal:  N Engl J Med       Date:  2009-07-23       Impact factor: 91.245

3.  Conservation of functionally important global motions in an enzyme superfamily across varying quaternary structures.

Authors:  Emily K Luebbering; Jacob Mick; Ranjan K Singh; John J Tanner; Ritcha Mehra-Chaudhary; Lesa J Beamer
Journal:  J Mol Biol       Date:  2012-08-27       Impact factor: 5.469

Review 4.  Innovative strategies to treat protein misfolding in inborn errors of metabolism: pharmacological chaperones and proteostasis regulators.

Authors:  Ania C Muntau; João Leandro; Michael Staudigl; Felix Mayer; Søren W Gersting
Journal:  J Inherit Metab Dis       Date:  2014-04-01       Impact factor: 4.982

5.  A kinetic study of the isozymes determined by the three human phosphoglucomutase loci PGM1, PGM2, and PGM3.

Authors:  C B Quick; R A Fisher; H Harris
Journal:  Eur J Biochem       Date:  1974-03-01

6.  The relative activities attributable to the three phosphoglucomutase loci (PGM1, PGM2, PGM3) in human tissues.

Authors:  P J McAlpine; D A Hopkinson; H Harris
Journal:  Ann Hum Genet       Date:  1970-10       Impact factor: 1.670

Review 7.  Understanding human glycosylation disorders: biochemistry leads the charge.

Authors:  Hudson H Freeze
Journal:  J Biol Chem       Date:  2013-01-17       Impact factor: 5.157

8.  Regulation of phosphoglucomutase 1 phosphorylation and activity by a signaling kinase.

Authors:  Anupama Gururaj; Christopher J Barnes; Ratna K Vadlamudi; Rakesh Kumar
Journal:  Oncogene       Date:  2004-10-21       Impact factor: 9.867

9.  Glycogen storage disease-like phenotype with central nervous system involvement in a PGM1-CDG patient.

Authors:  Nina Ondruskova; Tomas Honzik; Alzbeta Vondrackova; Marketa Tesarova; Jiri Zeman; Hana Hansikova
Journal:  Neuro Endocrinol Lett       Date:  2014       Impact factor: 0.765

10.  Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.

Authors:  Fabian Sievers; Andreas Wilm; David Dineen; Toby J Gibson; Kevin Karplus; Weizhong Li; Rodrigo Lopez; Hamish McWilliam; Michael Remmert; Johannes Söding; Julie D Thompson; Desmond G Higgins
Journal:  Mol Syst Biol       Date:  2011-10-11       Impact factor: 11.429

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  18 in total

1.  A novel phosphoglucomutase-deficient mouse model reveals aberrant glycosylation and early embryonic lethality.

Authors:  Bijina Balakrishnan; Jan Verheijen; Arielle Lupo; Kimiyo Raymond; Coleman Turgeon; Yueqin Yang; Kandis L Carter; Kevin J Whitehead; Tamas Kozicz; Eva Morava; Kent Lai
Journal:  J Inherit Metab Dis       Date:  2019-06-21       Impact factor: 4.982

2.  A Hotspot for Disease-Associated Variants of Human PGM1 Is Associated with Impaired Ligand Binding and Loop Dynamics.

Authors:  Kyle M Stiers; Lesa J Beamer
Journal:  Structure       Date:  2018-08-16       Impact factor: 5.006

3.  The Metabolic Map into the Pathomechanism and Treatment of PGM1-CDG.

Authors:  Silvia Radenkovic; Matthew J Bird; Tim L Emmerzaal; Sunnie Y Wong; Catarina Felgueira; Kyle M Stiers; Leila Sabbagh; Nastassja Himmelreich; Gernot Poschet; Petra Windmolders; Jan Verheijen; Peter Witters; Ruqaiah Altassan; Tomas Honzik; Tuba F Eminoglu; Phillip M James; Andrew C Edmondson; Jozef Hertecant; Tamas Kozicz; Christian Thiel; Pieter Vermeersch; David Cassiman; Lesa Beamer; Eva Morava; Bart Ghesquière
Journal:  Am J Hum Genet       Date:  2019-04-11       Impact factor: 11.025

4.  Biology, Mechanism, and Structure of Enzymes in the α-d-Phosphohexomutase Superfamily.

Authors:  Kyle M Stiers; Andrew G Muenks; Lesa J Beamer
Journal:  Adv Protein Chem Struct Biol       Date:  2017-05-17       Impact factor: 3.507

5.  Asp263 missense variants perturb the active site of human phosphoglucomutase 1.

Authors:  Kyle M Stiers; Abigail C Graham; Bailee N Kain; Lesa J Beamer
Journal:  FEBS J       Date:  2017-02-10       Impact factor: 5.542

6.  Disruption of the Responsible Gene in a Phosphoglucomutase 1 Deficiency Patient by Homozygous Chromosomal Inversion.

Authors:  Katsuyuki Yokoi; Yoko Nakajima; Tamae Ohye; Hidehito Inagaki; Yoshinao Wada; Tokiko Fukuda; Hideo Sugie; Isao Yuasa; Tetsuya Ito; Hiroki Kurahashi
Journal:  JIMD Rep       Date:  2018-05-12

7.  Induced Structural Disorder as a Molecular Mechanism for Enzyme Dysfunction in Phosphoglucomutase 1 Deficiency.

Authors:  Kyle M Stiers; Bailee N Kain; Abigail C Graham; Lesa J Beamer
Journal:  J Mol Biol       Date:  2016-03-10       Impact factor: 5.469

8.  Compromised catalysis and potential folding defects in in vitro studies of missense mutants associated with hereditary phosphoglucomutase 1 deficiency.

Authors:  Yingying Lee; Kyle M Stiers; Bailee N Kain; Lesa J Beamer
Journal:  J Biol Chem       Date:  2014-10-06       Impact factor: 5.157

9.  Disease severity and clinical outcome in phosphosglucomutase deficiency.

Authors:  Eva Morava; Sunnie Wong; Dirk Lefeber
Journal:  J Inherit Metab Dis       Date:  2015-03       Impact factor: 4.982

Review 10.  International consensus guidelines for phosphoglucomutase 1 deficiency (PGM1-CDG): Diagnosis, follow-up, and management.

Authors:  Ruqaiah Altassan; Silvia Radenkovic; Andrew C Edmondson; Rita Barone; Sandra Brasil; Anna Cechova; David Coman; Sarah Donoghue; Kristina Falkenstein; Vanessa Ferreira; Carlos Ferreira; Agata Fiumara; Rita Francisco; Hudson Freeze; Stephanie Grunewald; Tomas Honzik; Jaak Jaeken; Donna Krasnewich; Christina Lam; Joy Lee; Dirk Lefeber; Dorinda Marques-da-Silva; Carlota Pascoal; Dulce Quelhas; Kimiyo M Raymond; Daisy Rymen; Malgorzata Seroczynska; Mercedes Serrano; Jolanta Sykut-Cegielska; Christian Thiel; Frederic Tort; Mari-Anne Vals; Paula Videira; Nicol Voermans; Peter Witters; Eva Morava
Journal:  J Inherit Metab Dis       Date:  2020-09-15       Impact factor: 4.982

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